Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1330g00006 ATGTTTCCGACGACTAGGCTTATTTGCTTGGAAAACATTCATGCGAAATGTCTCTCTGTTGAATATACTGATAGAGTTGGAGAGGTTGCTAAGAAGCATGGATTGAAGATTCACATTGATGGAGCCCGTATTTTTAATGCAGCAGTTCTTGCTCCTAATACTTTGGAACGTGTTGCGCCACTGACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTCGTTATTGGATTTTCAATAGTGGTGTTTGGCAACAAGATATCTACACAAACTGGCATTGGAACCGTCGGGTTGGGAACTTGGCAGGCCGATCCTGGCCTCGTCGGTCAAGCCGTTGCTACCGCTATCAAGGCTGGTTACCGTCACATTGATGGCTCTCCAATCTACGGCAATGAGAAAGAGATTGGTTCTATATCGAAGAAACTGTTTGATGATGGCGTAATGAAACGTGAAGATTTGTTTATTACCTCGAAACTCTGTTAA 480 0.4313 MFPTTRLICLENIHAKCLSVEYTDRVGEVAKKHGLKIHIDGARIFNAAVLAPNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTVGLGTWQADPGLVGQAVATAIKAGYRHIDGSPIYGNEKEIGSISKKLFDDGVMKREDLFITSKLC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1330g00006 159 Pfam Aldo/keto reductase family 91 158 IPR023210 -
Vivi1330g00006 159 Pfam Triose-phosphate Transporter family 30 94 IPR004853 -
Vivi1330g00006 159 PANTHER ALDO/KETO REDUCTASE 87 158 - -
Vivi1330g00006 159 SUPERFAMILY PLP-dependent transferases 2 84 IPR015424 -
Vivi1330g00006 159 Pfam Beta-eliminating lyase 3 93 IPR001597 GO:0006520|GO:0016829
Vivi1330g00006 159 SUPERFAMILY NAD(P)-linked oxidoreductase 87 158 IPR036812 -
Vivi1330g00006 159 Gene3D - 87 159 IPR036812 -
Vivi1330g00006 159 Gene3D - 1 86 IPR015421 GO:0003824
Vivi1330g00006 159 ProSitePatterns Aldo/keto reductase family signature 1. 118 135 IPR018170 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1330g00006 50 94 Antiporters AT5G46110 95.556 1.68e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1330g00006 K00002 - vvo:131604307 131.339