Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1330g00004 ATGTTTCCGACGACTAGGCTTATTTGCTTGGAAAACATTCATGCGAAATGTCTCTCTGTTGAATATACTGATAGAGTTGGAGAGGTTGCTAAGAAGCATGGATTGAAGATTCACATTGATGGAGCCCGTATTTTTAATGCAGCAGTTCTTGCTCCTAATACTTTGGAACGTGTTGCGCCACTGACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTCGTTATTGGATTTTCAATAGTGGTGTTTGGCAACAAGATATCTACACAAACTGGCATTGGAACCGTCGGGTTGGGAACTTGGCAGGCCGATCCTGGCCTCGTCGGTCAAGCCGTTGCTACCGCTATCAAGGCTGGTTACCGTCACATTGATGGCTCTCCAATCTACGGCAATGAGAAAGAGATTGGTTCTATATCGAAGAAACTGTTTGATGATGGCGTAATGAAACGTGAAGATTTGTTTATTACCTCGAAACTCTGGTTTGTTTGTTTATATATTAGTATTAATATATTATAG 513 0.4133 MFPTTRLICLENIHAKCLSVEYTDRVGEVAKKHGLKIHIDGARIFNAAVLAPNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTVGLGTWQADPGLVGQAVATAIKAGYRHIDGSPIYGNEKEIGSISKKLFDDGVMKREDLFITSKLWFVCLYISINIL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1330g00004 170 Gene3D - 87 166 IPR036812 -
Vivi1330g00004 170 PANTHER ALDO/KETO REDUCTASE 87 160 - -
Vivi1330g00004 170 Pfam Aldo/keto reductase family 91 158 IPR023210 -
Vivi1330g00004 170 Pfam Beta-eliminating lyase 3 94 IPR001597 GO:0006520|GO:0016829
Vivi1330g00004 170 SUPERFAMILY NAD(P)-linked oxidoreductase 87 162 IPR036812 -
Vivi1330g00004 170 Pfam Triose-phosphate Transporter family 30 94 IPR004853 -
Vivi1330g00004 170 Gene3D - 1 86 IPR015421 GO:0003824
Vivi1330g00004 170 ProSitePatterns Aldo/keto reductase family signature 1. 118 135 IPR018170 GO:0016491
Vivi1330g00004 170 SUPERFAMILY PLP-dependent transferases 2 84 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1330g00004 50 94 Antiporters AT5G46110 95.556 3.11e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1330g00004 K00002 - vvo:131604307 135.576