Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1326g00011 ATGCTTCTTTCATGTCAAAATCACACTCTTTACCTTTCTTCTTCTTCTATCCATTTCTCAAAGAACTCAAAACCCAACATTATAACCAATTGCCAAAACCCAAATGAACAAAACCAAAACCAACCCATTCCCAGACGACACAATTCAAAATCCACTTCATTTCTCATCCACCATCTTTCACACAAAAACAGCGACAATCCTCACCCTTCACCTACCGAGCTACAAGACCCAACACCGCACGAAGAAAAAGTGAAGCTTTTAGAACTTTCCTTAGTAAGAAAAAGAACCCCACAATTTCCTGGTTCAATTTATGCCCAATCCCCTTCCGACTCTGATGTGGGTTCTTCTCTTCCTCCTCTTCGTACCCTTTTTAAATCGCGTGATGAAGAAGAAGAAGAGGTCATGATTATGAAAGCTCTTGAAATTCGTAGGAAGGTTACTCAAGAGGTTTTCAAAGAAGCTATGATAAAGGGTAAATTTGGAATTACTTATATAGAGAATTTGGTTTCTAGGTTGGGTGGTTTCATTGATTTTGTTATGATTGAAGCTGCTAACTTGAAAAGATTGCCTCAATATTCTCATTCTACTTTTAATTTACGCGCCAAAACTGTTATTGAAGATTCACAAGTTGTGCAACTTGTTAGATGGTTGAAGCATAATTCTCTATCGTATCCTCAAATAGCTAAGCTGATTTTGATGTCGAGGGGGAAACTTGAGTCCATAAGGAACCGTAGTGAGTGGTTGAAGTCGGTGCTTGTTAAGGGGGACTTTATTGGGGAGGCAATGTTGAAGGGTGGAGATAATATTTTGCTGCGGAGTGATCGGGAACTTGATGAGATTGTTGAGTGTTTAGAGTCCAATGGTGTAAGGAGGGAATGGATGGGTTATGTTGTGAGTCGGTGTCCGAAGTTGTTATCGTACAGCTTGGAAGAAGTGAAGATTCGTGTGCAGTTCTATCTGGATATGGGTCTAGATGAGAAGGATTTCGGTACCATGGTTTTCGATTTTCCTAAAGCACTTGGTTACTATACTCTGGAAGAAATGAACCGAAAGGTTGATTACTTGAAAGAATTTGGGCTTGATAGTAAGGATGTTGGTAAGTTGCTTGCATTTAGGCCACAATTAATGGCGTGCAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACCCGAGGTGGGATGAAGAGAATGCTTACTATTAAACCAATGGTCTTTTGTGTTGACTTGGAGATGACTATTGTGCCAAAGGTAAAGTTTTTTCAGGACCTGGGGGTTCGAAATGACGGGATTGCTAACATGCTTGTAAAATTTCCTACCCTACTCACCTACAGCCTGCACAAGAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGAAGAATCTATTGCAAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAGCATAGTACATAAGCTCGAAGTAAATGTAAAATATCATTTGTCTCTTGGCATACGTCTTCGGCAACTGGGTGAAATGGTCGCTGATTTCCCAATGCTGCTGAGATATAATATAGATGTTCTTCGTCCTAAGTATATTTATTTGCGGAAAACTATGGTCCGAACTTTACAAGATCTCATTCAGTTTCCGAGGTTTTTCAGCTATTCCCTCGAGGGTCGAATAATCCCAAGACACAAGGTTCTGGTGGAGAATCAGATAAATGTCAAGCTAAAATGCATGTTAGCTTGTACAGATGAAGAATTTAACAAAATGGTCAAGAATATGATTCAAAAACGCCACAAATTTCAATCTACTGTCATGAAGGGGAATACTCCGCATCCCCAGTCTCACGCTACTGGGGATATTACTACACGCCAGACGTAA 1884 0.4034 MLLSCQNHTLYLSSSSIHFSKNSKPNIITNCQNPNEQNQNQPIPRRHNSKSTSFLIHHLSHKNSDNPHPSPTELQDPTPHEEKVKLLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFKSRDEEEEEVMIMKALEIRRKVTQEVFKEAMIKGKFGITYIENLVSRLGGFIDFVMIEAANLKRLPQYSHSTFNLRAKTVIEDSQVVQLVRWLKHNSLSYPQIAKLILMSRGKLESIRNRSEWLKSVLVKGDFIGEAMLKGGDNILLRSDRELDEIVECLESNGVRREWMGYVVSRCPKLLSYSLEEVKIRVQFYLDMGLDEKDFGTMVFDFPKALGYYTLEEMNRKVDYLKEFGLDSKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRGGMKRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIANMLVKFPTLLTYSLHKKIRPVVIFLMTKAGVTEESIAKVVALGPELLGCSIVHKLEVNVKYHLSLGIRLRQLGEMVADFPMLLRYNIDVLRPKYIYLRKTMVRTLQDLIQFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDEEFNKMVKNMIQKRHKFQSTVMKGNTPHPQSHATGDITTRQT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1326g00011 627 MobiDBLite consensus disorder prediction 23 71 - -
Vivi1326g00011 627 MobiDBLite consensus disorder prediction 606 627 - -
Vivi1326g00011 627 PANTHER CGI-12 PROTEIN-RELATED 226 368 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 295 325 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 475 506 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 543 574 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 511 541 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 SMART mt_12 438 470 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 Pfam mTERF 282 588 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 Pfam mTERF 223 356 IPR003690 GO:0003690|GO:0006355
Vivi1326g00011 627 MobiDBLite consensus disorder prediction 23 79 - -
Vivi1326g00011 627 Gene3D Transcription termination factor 3, mitochondrial 372 604 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1326g00011 mTERF 7.7e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1326g00011 K15031 - qsa:O6P43_001902 865.914