Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1322g00004 ATGGGCGCTTTGCTTCTACCTGGTGTTGTATTCATCCCCTCTGATCTGGTTCTTGTTGGCTATTACCTTGCCAACAAAAACAATGAAGAGCTACATGATTTCAATGGCTCATACATCATCAAAGAAATGAACTTGTATGAGTTTGACCCCTTTGAATTACCTCATGCATCATCCTTTCAATTCAACAATCGGAGGCACTGGTACTATTTTATTTCAAAAATTGACGAAGAGAGGAGGCATTGGAAGAAGAAGAAGGGAAATGTTTGTGAAATTACTAATGGTGGTAACACACTTTTGGGAATGAAAGCTCTCTTTGTTTTTTATCTCGGAAAATCCCCTAATGATGCTGAAAGAACTAACTGGACTATGTATGAGTATACCTTGGCGGATAAACCTCATGCTCCTTTTGTTGTTTGTCGTATTTTTGAATGCCCTCCAGAGATTGATGTGGATTATGAGTTCGGGCCTATATCTGATGTTGATGAAACTGATATTGATGAGGCTGATATCGATGAAAGTGATGTTCTAGAAATTCCTTTCGCCGGAGAAGAAGAACAAACCGCCGCTGGCGGTGGTCTGAATGTAGCAGTGATCAGTCAAGGACATGCGTGGCTCAATCGCGATGCTCCATTGGACGGTCAAAGACTCAACCGTCTCTCTCTCACGCTCATTGGCTAG 678 0.4189 MGALLLPGVVFIPSDLVLVGYYLANKNNEELHDFNGSYIIKEMNLYEFDPFELPHASSFQFNNRRHWYYFISKIDEERRHWKKKKGNVCEITNGGNTLLGMKALFVFYLGKSPNDAERTNWTMYEYTLADKPHAPFVVCRIFECPPEIDVDYEFGPISDVDETDIDEADIDESDVLEIPFAGEEEQTAAGGGLNVAVISQGHAWLNRDAPLDGQRLNRLSLTLIG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1322g00004 225 Gene3D NAC domain 14 146 IPR036093 GO:0003677|GO:0006355
Vivi1322g00004 225 SUPERFAMILY NAC domain 4 142 IPR036093 GO:0003677|GO:0006355
Vivi1322g00004 225 ProSiteProfiles NAC domain profile. 5 144 IPR003441 GO:0003677|GO:0006355
Vivi1322g00004 225 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 144 - -
Vivi1322g00004 225 Pfam No apical meristem (NAM) protein 7 128 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1322g00004 3 141 NAC Transcription Factor Family AT2G27300 32.667 1.19e-20 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1322g00004 NAM 5.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1322g00004 - - vvo:131641217 450.284