Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1322g00002 ATGGCTGCTTTTCTTCCACCTGGTGTTGTTTTCATTCCTAATGATGAGATTCTTATTGGCTATTACCTTGCCAACAAAAATAATGAAGAGCTCCATATTTTCAATGGCTCACACATGATTAAAGAGATGAACCTATATGACACTGATCCCTTCGAATTAAGACATTGCACGACCGGATTTTGGAAGAAGAAAGGAAATGTTCGTAACATTACTAATGCAGATAACGTAGTTTTAGGAACTAAAACTCTCTTTGTTTTCTATCTTGGAAAATCCCCAAATGATTCAGAAAGAACTAATTGGACTATGTATGAATATGCTTTGGCAAACAATCCGCAGGCTCGTTTTGTTCTTTGTAGAGTATTTGATTGCCCAATAGAGATGGAAGTGGATGATGAGTTTGGGCCTATATCTGATGTTGATGAGACTGACTGTGATGAAAGTGATAATGAACTTGAGAAATTCCACTTATGA 471 0.3652 MAAFLPPGVVFIPNDEILIGYYLANKNNEELHIFNGSHMIKEMNLYDTDPFELRHCTTGFWKKKGNVRNITNADNVVLGTKTLFVFYLGKSPNDSERTNWTMYEYALANNPQARFVLCRVFDCPIEMEVDDEFGPISDVDETDCDESDNELEKFHL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1322g00002 156 Gene3D NAC domain 53 124 IPR036093 GO:0003677|GO:0006355
Vivi1322g00002 156 ProSiteProfiles NAC domain profile. 1 123 IPR003441 GO:0003677|GO:0006355
Vivi1322g00002 156 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 57 122 - -
Vivi1322g00002 156 Pfam No apical meristem (NAM) protein 6 54 IPR003441 GO:0003677|GO:0006355
Vivi1322g00002 156 Pfam No apical meristem (NAM) protein 57 107 IPR003441 GO:0003677|GO:0006355
Vivi1322g00002 156 SUPERFAMILY NAC domain 3 121 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1322g00002 1 151 NAC Transcription Factor Family AT1G32510 30.660 3.82e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1322g00002 NAM 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1322g00002 - - vvo:131638864 332.798