Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi131g00018 ATGGAGAGTGGTTGGAAAGCTACAACTGAGATATCACCAAACTGTCCAAGATGTGGTTCCTCCAACACAAAATTCTGCTACTACAACAACTACAGCTTAACTCAACCAAGATACTTTTGCAAAGGATGCAGAAGATATTGGACAAAAGGTGGATCCCTCAGAAACGTCCCTGTTGGTGGTGGCTGCAGAAAAAACAGAAGAGGTAACAACAACAACAAAACCTTGTTAAAACAACATTCTCATGATCCTGTTTTAAGGACTAATAATGTTTCATCTTCTACTTCCTCTTCATTGGTTGCTGAATATCATAAACCCAATATTGATCTTGCTTTAGTTTACGCGAATTTCCTTAATCAAAAGCCTGGTTCTCAAAAAATCAGTTTCGACCCTTCTTTAGAGAATTCGAGGTTGTTATCGAATGTTGAAGTTGGTTCGAGTAGTTTGAATTTATCGGAACTAGAACATGGTTTCAAAGGGTGTTTGAATCTTCATGATCAGTTACTAGTACCATCCACATCCACAGTGGTAACACATTTTGGTGAGTTCGAACTCTATTCTATGCAGACGCTTCGAAAAGATAGAGTTCATGATGATGGTAGTGTGAACTTTGAGCTACCACCTTTGCCTGGTGAAGAGGATTCATCATCACATGATGATCATGTGATGTGGTCCAATTCTGAAATGATGATGAACCTTCCATTTCAAGTCACTCAACCTCCACCACCACCGCCACCACTTCTTGGTCTTGATCAAATTCATCATGCTGATTTGTTAGTTGGTAATTGGAGCCCTTTTGATTTTCCAAGGGATGCTTCTTTCTCTAGACCTTGTTAA 834 0.3945 MESGWKATTEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNNNKTLLKQHSHDPVLRTNNVSSSTSSSLVAEYHKPNIDLALVYANFLNQKPGSQKISFDPSLENSRLLSNVEVGSSSLNLSELEHGFKGCLNLHDQLLVPSTSTVVTHFGEFELYSMQTLRKDRVHDDGSVNFELPPLPGEEDSSSHDDHVMWSNSEMMMNLPFQVTQPPPPPPPLLGLDQIHHADLLVGNWSPFDFPRDASFSRPC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi131g00018 277 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Vivi131g00018 277 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Vivi131g00018 277 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Vivi131g00018 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 153 IPR045174 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi131g00018 7 271 C2C2-Dof Transcription Factor Family AT3G52440 40.625 8.94e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi131g00018 zf-Dof 4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi131g00018 - - vvo:131625031 550.821