Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi131g00005 ATGACCTACTCCTTGACTTCTACCTTGACTTTGTTGGTTTCTATGATTTTCTTGAATTTTTCCTTTCCTTTTATAGTCAAGACTAAAGAAGTGATAAGTTTCCTTCTTTCAAGTGAAGTTATGCCATTGTGCCTACAAAGTATGCAAATTGGCAGAGAATTTTCAAGAACTGTTGTAACATTTATCGTTGAGAAAATTCTGTCTGATGACGATGGTTTGGCTTATGTTTATGCTACACCAGACCGCTATTATGCAGTCGGTCGAGCTTTGGACGTGATGTTGGGAGATATTGAAAATCAGCCTTCACCTCGTCTTTTGAAGCTTATGATTCCGTGTTATTCTTGCCTCACCAGAAACTCGGCGTTGTTTAACCAGAGAGCAGCTCCACCATTTTAA 396 0.3889 MTYSLTSTLTLLVSMIFLNFSFPFIVKTKEVISFLLSSEVMPLCLQSMQIGREFSRTVVTFIVEKILSDDDGLAYVYATPDRYYAVGRALDVMLGDIENQPSPRLLKLMIPCYSCLTRNSALFNQRAAPPF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi131g00005 131 Pfam Cell differentiation family, Rcd1-like 27 122 - -
Vivi131g00005 131 Gene3D - 6 128 IPR011989 -
Vivi131g00005 131 PANTHER UNCHARACTERIZED 26 121 IPR007216 GO:0006402|GO:0030014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Vivi131g00005 Rcd1 1.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi131g00005 K12606 - vvo:131625024 249.98