Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi131g00004 ATGTTCACCACTCATCGCCATAGATCCATTCTCTATCTCAAAGCCTTAACTTTTCCCCCAACCTCAAACCCTAACCCTATTTTCCACCATTTCTGCACCACCTCTTCCAATTCAACCCCATTTACAGTCTCCTACCTCATCCACAATCTCGGCTTCTCCCCACAACTTGCTTCCAAACTTTCCTCCACATACAGTCTCCGTTTCAAAACCAACCAAAACCCTGATTTAGTTCTCAACTTCTTTAGAACCCATGGTTTATCTGATTCCCAACTACGCCACATGATTGCCAAGGCACCATGGCTACTTTCCTGTGACCCTTTCAAAAGGGTCTTACCAAAGTTTCAATTTTTTCTCTCTAAAGGCGCTTCTACCTCTGACATTGTTAACCTTGTCACTAAGTGCCCTGCGATTCTCTCTCCAAGCCTGAAGAATCATATAGTCCCAACCTATGAATTTCTCAGTAGATTCTTGCAATCTCACAAGGACATTGTTGCTTATGCAATTCAAAATCATGTTTTATTTAGTCGCCATAACGTGTCACGTAACGTTAGAATGTTGATTGAGAGTGGAGTTCCGGAGTCGAGCATTTCTAGATTGCTTCGGATGAATAGCAAGGTACTCAACAGCACAAAAGGTCTTCTGAAGCTCGTGGAGGAAGTAAAGGATTTGGGGTTTAATCCTTCGCATTCACATTTCTCAATAGCTTTGCATGCCAAAAGAACAGTATTGGAAGCCAGTTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCAGATGAAGATGTTCTAGAAGCATTTCGAAGGCATCCTCATTGTATGTTAGCATCTGTTGATAAAATTAACTTAATAATGAACTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCTAATGTACCAAGGATTTTGGGGGCCAGTATGGAGAGAAAGATCATACCAAGGTCCTCAGTTCTGCAATATCTTCTGAAGAATGGTTTGCTAAAAGAGAAAGCAAGTTTAACTTCTCCATTTCTAGTCGGCGATGAGACGTTCATTGAAAAATATATAAAGCCTTTTAAGGAGGACTCTTCTTATCTCTTAAAGCTTTATGAAGAAAAACTGAATCTTGCACACGACAAGGACAACAAAGATGGCATGATATGA 1155 0.4087 MFTTHRHRSILYLKALTFPPTSNPNPIFHHFCTTSSNSTPFTVSYLIHNLGFSPQLASKLSSTYSLRFKTNQNPDLVLNFFRTHGLSDSQLRHMIAKAPWLLSCDPFKRVLPKFQFFLSKGASTSDIVNLVTKCPAILSPSLKNHIVPTYEFLSRFLQSHKDIVAYAIQNHVLFSRHNVSRNVRMLIESGVPESSISRLLRMNSKVLNSTKGLLKLVEEVKDLGFNPSHSHFSIALHAKRTVLEASWKEKVDAFKKWGWSDEDVLEAFRRHPHCMLASVDKINLIMNFWVNQLGWDAMAIANVPRILGASMERKIIPRSSVLQYLLKNGLLKEKASLTSPFLVGDETFIEKYIKPFKEDSSYLLKLYEEKLNLAHDKDNKDGMI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi131g00004 384 Gene3D Transcription termination factor 3, mitochondrial 141 361 IPR038538 -
Vivi131g00004 384 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 SMART mt_12 197 226 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 FunFam Mitochondrial transcription termination factor-like 142 360 - -
Vivi131g00004 384 PANTHER CGI-12 PROTEIN-RELATED 38 357 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 Pfam mTERF 245 348 IPR003690 GO:0003690|GO:0006355
Vivi131g00004 384 Pfam mTERF 78 226 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi131g00004 mTERF 8.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi131g00004 K15031 - gmx:102663414 392.119