Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1317g00003 ATGAACTTGGGTGGCATTTTTCTCTTTGGTCACTGTTTGAGTTGGTCTGGTTGGATTTTGATGCATGCATTTGTTCTGAAAAAAATTCCAGCACAACTCACTGTTTCTGCTTTTACTTGCTTATTTGGTATTGTGCAGTTTGGGACGATTGCAACATTTCTTGAGAAGGATCCCAAAGCTTGGCAGCTCAATTCCTTTGAAGAGGCCTATTGTATTTTGTACTCGGGAGTGGTGATTTCAGGAGTGGCAGCAGCAATACAAATATGGACTATTAGAAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACATTGCTGGTAGCTTTTTCTAATATTTTTCAATTACTGCAGGGACATGTTAACCATTTGCTTAAACTTGATGGTGCAAAGGATAGGTTGCAACTCTTCAAGGCTGATTTAGTAGAAGAATGTTCTTTTGACTCTATTATTCACGACTGTCACGGGTCTTTCATATTGTTTCACTGGCTCGTTTTGTTGTTGACAACCCTCATGTGGTGGAGGTAA 534 0.4007 MNLGGIFLFGHCLSWSGWILMHAFVLKKIPAQLTVSAFTCLFGIVQFGTIATFLEKDPKAWQLNSFEEAYCILYSGVVISGVAAAIQIWTIRKGGPVLASIYLPLQTLLVAFSNIFQLLQGHVNHLLKLDGAKDRLQLFKADLVEECSFDSIIHDCHGSFILFHWLVLLLTTLMWWR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1317g00003 177 Gene3D - 118 166 - -
Vivi1317g00003 177 PANTHER WAT1-RELATED PROTEIN 3 116 IPR030184 GO:0016020|GO:0022857
Vivi1317g00003 177 Pfam EamA-like transporter family 4 116 IPR000620 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1317g00003 2 111 Nodulin-like Gene Family AT1G75500 55.455 6.74e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1317g00003 - - vvo:131641198 351.288