Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1316g00002 ATGGACAATTTGGAGTCAAACAAAGATGATGAACTGACGCTTAATACTACACAAGATGTTCATATACCTGTTTCAATTGAGACAAATCAAGAGGTTCCAAGTTGTGATGAAGAAATCAAGCCTAAGGTAGGACAAATTTTTGATTCACTCGAAGATGGTGAAATGTTTTACAAAAATTATGCACATAGTGTTGGTTTTAGTGTGCGTTGTTCATCAGAAAATAAAAATAAAGATGGTGTCAAACGTTTCGTCTGCTCAAAAGAGGGTTACAAACCAAATGTATCAAAAGAGAAAGAAGTGAGTGAATTGGGAGTTAAAGTCAAGAGGAGGAGTCTTACAAGAGAAGGATGTGATGTGAAAGATGCTTTCAAGCTGTTAGAGGGAGGTAAGTATGAGCTAACTCGATTTCAAGAGAGTCATACACATGCACTTGCCTCACCTAAAAAGAGACAATTTCTTAGATCGGCAAGCATGTGGTCAATATGCATATCATGA 495 0.3677 MDNLESNKDDELTLNTTQDVHIPVSIETNQEVPSCDEEIKPKVGQIFDSLEDGEMFYKNYAHSVGFSVRCSSENKNKDGVKRFVCSKEGYKPNVSKEKEVSELGVKVKRRSLTREGCDVKDAFKLLEGGKYELTRFQESHTHALASPKKRQFLRSASMWSICIS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1316g00002 164 Pfam FAR1 DNA-binding domain 56 145 IPR004330 -
Vivi1316g00002 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 155 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1316g00002 FAR1 9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1316g00002 - - vvo:131641197 334.724