Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1316g00001 ATGGACAATTTGGAGTCAAACAAAGATGATGAACTGACGCTTAATACTACACAAGATGTTCATATACCTGTTTCAATTGAGACAAATCAAGAGGTTCCAAGTTGTGATGAAGAAATCAAGCCTAAGGTAGGACAAATTTTTGATTCACTCGAAGATGGTGAAATGTTTTACAAAAATTATGCACATAGTGTTGGTTTTAGTGTGCGTTGTTCATCAGAAAATAAAAATAAAGATGGTGTCAAACGTTTCGTCTGCTCAAAAGAGGGTTACAAACCAAATGTATCAAAAGAGAAAGAAGTGAGTGAATTGGGAGTTAAAGTCAAGAGGAGGAGTCTTACAAGAGAAGGATGTGATGTGAAAGATGCTTTCAAGCTGTTAGAGGGAGGGATTGAAAGATAA 399 0.3584 MDNLESNKDDELTLNTTQDVHIPVSIETNQEVPSCDEEIKPKVGQIFDSLEDGEMFYKNYAHSVGFSVRCSSENKNKDGVKRFVCSKEGYKPNVSKEKEVSELGVKVKRRSLTREGCDVKDAFKLLEGGIER 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1316g00001 132 Pfam FAR1 DNA-binding domain 56 118 IPR004330 -
Vivi1316g00001 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 124 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1316g00001 FAR1 9.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1316g00001 - - vvo:131641197 264.233