Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1305g00009 ATGACGTTCAAGCGCAGGAATGGAGGTCGCAACAAGCACGGCCGTGGCCATGTCAAATTCATCCGTTGCTCGAACTGTGGAAAATGCTGCCCTAAGGATAAGGCCATCAAGCGTTTTCTTGTGAGGAACATTGTTGAACAGGCTGCTGTCAGAGATGTTCAGGAAGCTTGTGTTTATGATCAATACACTCTTCCTAAGCTCTATGTCAAGATGCAATACTGTGTGTCCTGCGCTATTCACTCTCATGTTGTGAGGGTCAGATCTCGCACTGATAGGAGGAAGCGTGACCCTCCTCAGCGTTTCATTAGGCGCAGGGATGATGCTCCAAGACCCGGCCAACCCGGTCAAGCTCCCCGCCCTGCTGGACCCGGTGCTCCCCCAGCCCGTACCTAG 393 0.5293 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGPGAPPART 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1305g00009 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Vivi1305g00009 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Vivi1305g00009 130 MobiDBLite consensus disorder prediction 113 130 - -
Vivi1305g00009 130 MobiDBLite consensus disorder prediction 85 130 - -
Vivi1305g00009 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Vivi1305g00009 130 MobiDBLite consensus disorder prediction 90 110 - -
Vivi1305g00009 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Vivi1305g00009 130 FunFam 40S ribosomal protein S26 1 114 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1305g00009 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 4.95e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1305g00009 K02976 - gmx:100781822 212.616