Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi12g00011 ATGCTTAAAGAAATAAAACTAATGTTTATTTGGTTTTATTCAGATACAGGAATGGGAACAAGTCTCAGCATTCCCAGAACTGAAAAGTTCTCTGAAGATGGTGAAAATGAGAATCTTAGATATGGATTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACACGCGGCGCATCTAGATGTGGATTCATCCACTTCGTTTTTTGGCGTTTATGATGGTCATGGAGGTAAAGCAGTTGCAAAGTTTTGTGCAAAGTATCTTCACCAACAGGTACTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCTCTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGCGATAAGGTAAAAGGATTCAATGGAATGATTGAAGGATTGATTCGGTCTCCAAGAAGCAGTGATAATAATAAGGACCAAAATGATGATTGGGGATTTGAGAAGGGGCCTCATTCTGATTTTGATGGACCAACTTCAGGAAGTACTGCCTGTGTCGCAATCATTAGAAACAATCTAATTTTTGTCGCGAATGCCGGTGATTCTCGCTGCATAATATCTAGGAATGGTCAGGCTTACAATTTGTCTAGAGACCACAAACCAGAACTTGCGATTGAGAAGGAAAGAATCTATAAAGCTGGAGGTTTTATTCACGCCGGACGAGTTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGACGTGGACTTTAAGAATAATAGATTTCTTTCGGCTGAGAAGCAAGTCGTCACTGCTAATCCAGACATAAACATTGTTGACCTTCATGACGAAGATGAATTTATAGTGATAGCTTGTGATGGAATATGGGATTGCCTGTCAAGCCAGCAATTGGTAGATTTTGTACGCCAAGAACTTCTCGTGGATACCAAACTTTCTGAGGTTTGTGAAAGAGTCCTCGACCGGTGTTTGGCACCATCTTTGGCTATGGGTGACGGATGCGATAACATGACAATGATCTTGGTACAGTTCAAAAAACCAGTCCAGACTAATGCACCAGCTCAAGAACAATCATCTTCAAATGAACAAGGTGCATCTGAACCAATATTGGAGAGCAGTTGA 1131 0.4103 MLKEIKLMFIWFYSDTGMGTSLSIPRTEKFSEDGENENLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKSEEYIAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSSDNNKDQNDDWGFEKGPHSDFDGPTSGSTACVAIIRNNLIFVANAGDSRCIISRNGQAYNLSRDHKPELAIEKERIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLVDTKLSEVCERVLDRCLAPSLAMGDGCDNMTMILVQFKKPVQTNAPAQEQSSSNEQGASEPILESS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi12g00011 376 CDD PP2Cc 40 347 IPR001932 -
Vivi12g00011 376 SUPERFAMILY PP2C-like 21 348 IPR036457 -
Vivi12g00011 376 ProSiteProfiles PPM-type phosphatase domain profile. 40 347 IPR001932 -
Vivi12g00011 376 PANTHER PROTEIN PHOSPHATASE 2C 35 346 IPR015655 GO:0004722|GO:0006470
Vivi12g00011 376 MobiDBLite consensus disorder prediction 354 376 - -
Vivi12g00011 376 SMART PP2C_4 30 345 IPR001932 -
Vivi12g00011 376 Pfam Protein phosphatase 2C 40 120 IPR001932 -
Vivi12g00011 376 Pfam Protein phosphatase 2C 173 329 IPR001932 -
Vivi12g00011 376 Gene3D - 17 348 IPR036457 -
Vivi12g00011 376 MobiDBLite consensus disorder prediction 146 174 - -
Vivi12g00011 376 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Vivi12g00011 376 MobiDBLite consensus disorder prediction 153 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi12g00011 18 350 PP2C-type Phosphatase Gene Family AT2G25070 73.574 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi12g00011 K17499 - gmx:100793667 577.015