Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi12g00010 ATGTTGAATTGCAAAAGTTGTGATACAGGAATGGGAACAAGTCTCAGCATTCCCAGAACTGAAAAGTTCTCTGAAGATGGTGAAAATGAGAATCTTAGATATGGATTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACACGCGGCGCATCTAGATGTGGATTCATCCACTTCGTTTTTTGGCGTTTATGATGGTCATGGAGGTAAAGCAGTTGCAAAGTTTTGTGCAAAGTATCTTCACCAACAGGTACTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCTCTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGCGATAAGGTAAAAGGATTCAATGGAATGATTGAAGGATTGATTCGGTCTCCAAGAAGCAGTGATAATAATAAGGACCAAAATGATGATTGGGGATTTGAGAAGGGGCCTCATTCTGATTTTGATGGACCAACTTCAGGAAGTACTGCCTGTGTCGCAATCATTAGAAACAATCTAATTTTTGTCGCGAATGCCGGTGATTCTCGCTGCATAATATCTAGGAATGGTCAGGCTTACAATTTGTCTAGAGACCACAAACCAGAACTTGCGATTGAGAAGGAAAGAATCTATAAAGCTGGAGGTTTTATTCACGCCGGACGAGTTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGACGTGGACTTTAAGAATAATAGATTTCTTTCGGCTGAGAAGCAAGTCGTCACTGCTAATCCAGACATAAACATTGTTGACCTTCATGACGAAGATGAATTTATAGTGATAGCTTGTGATGGAATATGGGATTGCCTGTCAAGCCAGCAATTGGTAGATTTTGTACGCCAAGAACTTCTCGTGGATACCAAACTTTCTGAGGTTTGTGAAAGAGTCCTCGACCGGTGTTTGGCACCATCTTTGGCTATGGGTGACGGATGCGATAACATGACAATGATCTTGGTACAGTTCAAAAAACCAGTCCAGACTAATGCACCAGCTCAAGAACAATCATCTTCAAATGAACAAGGTGCATCTGAACCAATATTGGAGAGCAGTTGA 1110 0.4162 MLNCKSCDTGMGTSLSIPRTEKFSEDGENENLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKSEEYIAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSSDNNKDQNDDWGFEKGPHSDFDGPTSGSTACVAIIRNNLIFVANAGDSRCIISRNGQAYNLSRDHKPELAIEKERIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLVDTKLSEVCERVLDRCLAPSLAMGDGCDNMTMILVQFKKPVQTNAPAQEQSSSNEQGASEPILESS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi12g00010 369 MobiDBLite consensus disorder prediction 139 167 - -
Vivi12g00010 369 Gene3D - 10 341 IPR036457 -
Vivi12g00010 369 MobiDBLite consensus disorder prediction 146 161 - -
Vivi12g00010 369 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Vivi12g00010 369 SMART PP2C_4 23 338 IPR001932 -
Vivi12g00010 369 CDD PP2Cc 33 340 IPR001932 -
Vivi12g00010 369 PANTHER PROTEIN PHOSPHATASE 2C 28 339 IPR015655 GO:0004722|GO:0006470
Vivi12g00010 369 Pfam Protein phosphatase 2C 33 113 IPR001932 -
Vivi12g00010 369 Pfam Protein phosphatase 2C 166 322 IPR001932 -
Vivi12g00010 369 ProSiteProfiles PPM-type phosphatase domain profile. 33 340 IPR001932 -
Vivi12g00010 369 MobiDBLite consensus disorder prediction 347 369 - -
Vivi12g00010 369 SUPERFAMILY PP2C-like 14 341 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi12g00010 11 343 PP2C-type Phosphatase Gene Family AT2G25070 73.574 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi12g00010 K17499 - qsa:O6P43_015776 572.392