Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi12g00008 ATGGGAACAAGTCTCAGCATTCCCAGAACTGAAAAGTTCTCTGAAGATGGTGAAAATGAGAATCTTAGATATGGATTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACACGCGGCGCATCTAGATGTGGATTCATCCACTTCGTTTTTTGGCGTTTATGATGGTCATGGAGGTAAAGCAGTTGCAAAGTTTTGTGCAAAGTATCTTCACCAACAGGTACTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCTCTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGCGATAAGGTAAAAGGATTCAATGGAATGATTGAAGGATTGATTCGGTCTCCAAGAAGCAGTGATAATAATAAGGACCAAAATGATGATTGGGGATTTGAGAAGGGGCCTCATTCTGATTTTGATGGACCAACTTCAGGAAGTACTGCCTGTGTCGCAATCATTAGAAACAATCTAATTTTTGTCGCGAATGCCGGTGATTCTCGCTGCATAATATCTAGGAATGGTCAGGCTTACAATTTGTCTAGAGACCACAAACCAGAACTTGCGATTGAGAAGGAAAGAATCTATAAAGCTGGAGGTTTTATTCACGCCGGACGAGTTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGACGTGGACTTTAAGAATAATAGATTTCTTTCGGCTGAGAAGCAAGTCGTCACTGCTAATCCAGACATAAACATTGTTGACCTTCATGACGAAGATGAATTTATAGTGATAGCTTGTGATGGAATATGGGATTGCCTGTCAAGCCAGCAATTGGTAGATTTTGTACGCCAAGAACTTCTCGTGGATACCAAACTTTCTGAGGTTTGTGAAAGAGTCCTCGACCGGTGTTTGGCACCATCTTTGGCTATGGGTGACGGATGCGATAACATGACAATGATCTTGGTACAGTTCAAAAAACCAGTCCAGACTAATGCACCAGCTCAAGAACAATCATCTTCAAATGAACAAGGTGCATCTGAACCAATATTGGAGAGCAGTTGA 1080 0.4185 MGTSLSIPRTEKFSEDGENENLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKSEEYIAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSSDNNKDQNDDWGFEKGPHSDFDGPTSGSTACVAIIRNNLIFVANAGDSRCIISRNGQAYNLSRDHKPELAIEKERIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLVDTKLSEVCERVLDRCLAPSLAMGDGCDNMTMILVQFKKPVQTNAPAQEQSSSNEQGASEPILESS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi12g00008 359 SMART PP2C_4 13 328 IPR001932 -
Vivi12g00008 359 MobiDBLite consensus disorder prediction 129 157 - -
Vivi12g00008 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Vivi12g00008 359 MobiDBLite consensus disorder prediction 136 151 - -
Vivi12g00008 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Vivi12g00008 359 Gene3D - 1 331 IPR036457 -
Vivi12g00008 359 MobiDBLite consensus disorder prediction 337 359 - -
Vivi12g00008 359 CDD PP2Cc 23 330 IPR001932 -
Vivi12g00008 359 PANTHER PROTEIN PHOSPHATASE 2C 19 329 IPR015655 GO:0004722|GO:0006470
Vivi12g00008 359 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Vivi12g00008 359 Pfam Protein phosphatase 2C 156 312 IPR001932 -
Vivi12g00008 359 SUPERFAMILY PP2C-like 4 331 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi12g00008 1 333 PP2C-type Phosphatase Gene Family AT2G25070 73.574 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi12g00008 K17499 - qsa:O6P43_015776 572.392