Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1298g00009 ATGGCCAAGAAAACCCTCTCTTCTGCTCCATCTTCATCTCAAAACTCACATGCACACAAAACCATTCCAGATCCAACACCAACACCACTCTCTTCTCAGTCTCACCCCCCACAAACCCAACCACTTCCCACTTCAAACTCTCTCCGCCCCAACCGTTCAAAAAAACCCACACCCGTCGCCGCCGCCGCTGCTGCCGCCGCCGAATCCTCCAAACGGTCCCAGAGAGTCTTCTTCACTCCCGACGATGTGTTGCTCATTCTTAAATCCCTTTCGGATTTCAAATCCAAAACCGGAAAAGACCCGGTCAAACACTTTCATGATTTTCACGACTCGTTGAAGAGTGCGCTCAACATCAAAGCTACAGAAAGGAAACTCAGAGAGAAGATTCGTGTGTTGAAGATCAAGTTTCAGAAGCAATGTGAAACCGAAGAAGAATATATCAATTTTTCCAGTCCTTTCGAAGAGGAAGTTTTTGAACTTTCCAAGAAATTTTGGGGTCAAGATAATCATGTTGAAGAAGAAGAAAAATCACCTGAGAAGGATAATGCTGCTAAGATACTGATGAAGCTGGAAGAACCACCCAAGAAGGAAAATGCTGCTAAGAAACCATCTACATCGAAGAAACCGGTCCAGGAAGAACCACCCAAGAAGGCTAAGAATCCATCATCATCGAAGAAGAGGCCGATCCAGGAAGAGCTATCATCGGTTGTTGACAGTGATCAAAGGGGTCGTCTTAGTTTGAGTGAAATGTTTCGTTTTGGTGCAATGTGTATGGATGTGAATGTGCTCAAGAGGGGAATGGATTTAGTTGGGGAATCTGAGAGGGAAGAATTGGAAACAAGGTGGAAGAAGTTGAAAGTTCAAGAGGCGGAAGTGTTTCTGAAGCGTGCGGAGTTGGCTGTAAATCAAGGTAGAATGATTTTGAAGGAATTGCGGAGATCCTCTTAG 948 0.4504 MAKKTLSSAPSSSQNSHAHKTIPDPTPTPLSSQSHPPQTQPLPTSNSLRPNRSKKPTPVAAAAAAAAESSKRSQRVFFTPDDVLLILKSLSDFKSKTGKDPVKHFHDFHDSLKSALNIKATERKLREKIRVLKIKFQKQCETEEEYINFSSPFEEEVFELSKKFWGQDNHVEEEEKSPEKDNAAKILMKLEEPPKKENAAKKPSTSKKPVQEEPPKKAKNPSSSKKRPIQEELSSVVDSDQRGRLSLSEMFRFGAMCMDVNVLKRGMDLVGESEREELETRWKKLKVQEAEVFLKRAELAVNQGRMILKELRRSS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1298g00009 315 PANTHER BNAANNG10740D PROTEIN-RELATED 12 309 IPR007592 GO:0006355
Vivi1298g00009 315 MobiDBLite consensus disorder prediction 190 226 - -
Vivi1298g00009 315 MobiDBLite consensus disorder prediction 37 53 - -
Vivi1298g00009 315 MobiDBLite consensus disorder prediction 190 238 - -
Vivi1298g00009 315 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1298g00009 315 Pfam Protein of unknown function, DUF573 74 166 IPR007592 GO:0006355
Vivi1298g00009 315 MobiDBLite consensus disorder prediction 1 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1298g00009 68 309 GeBP Transcription Factor Family AT4G25210 29.297 6.16e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi1298g00009 DUF573 1.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1298g00009 - - vvo:131641073 589.341