Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1295g00001 ATGGTCTTCCCTTCTCTTCCAATCTATCTAGATCCAACCAACTGGTCACAACAGCAAGCAGGAATTGGTATTGAAACTCAAAATCCGTCGCATCTGCAACAGCCATCAGCTTCAACTGTGGCAGGTATCACAGTTAAAGCTGATGGCTGCTATCAAGGGTCTATAAGACCAGGATCAATGACGGATCGAGCTAGGATGTCAAAGATACACCAAACCGACACTGGTGCTGCTGGAGTACAAAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGCTACTACAACAACTATAGTCTTTCGCAGCCACGCCATTTTTGCAAAGCTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTAGAAATGTTCCAGTTGGAGGTGGTTGTAGAAAGAATAATAAAAGAAGCAAAGGAAATTCAGTATCAAAAATGCCGTCTAAACCTAATCGAAGTAATGATCATCGCCGGGTCGGTATTGGTGCTATTGTAGGTGGGTCTAGCTCAGAAAATGCAAAATCTAATGGATGCAATAATTCTAATGTGAATATGGGAATGTCTCATTTTCCAACTCAATTCCCTTTTTTTCCTTCTTTGCATCATTATAACAATAATGACTATGTTTCTCAAGGCATTGGTTCTATGGTGACAAAAAATATTACCAATAGTACTAATGTTGAGTTTCAACTCGGTAGAGATTCTTCAGTTGGTAATAACAATAATGGAGATTCTTTGTTGTTATCAAATGGAATCGGCGAACAATGGAGGTTTCTGAATCCGCTACAAGTTCATCATCATCAGCAACAACCGCAACCGCAACAACAGCAACAACAACAAGGACATAATGTTCAACAATTTCCTTTCATGACAAATTTGGAGCCACAAGTTGGATTATTTCAATTTGGTGGAGAAAATAATGGTGAAACTTCAAGAAGTTTTATAAGTTCTAAGGCAATGGATTCTTCAAGTGCTAGTATTGGAATGGTGAAAATGGAAGAAAATAATCATCAAAGGTTGAGTTTGCCAAAGAATCTCTTGAGTGGTTCCGGAAATAGTAATGATCTATTTTGGAATGAAGTTCCTAGTTTCACTCCTTCATCAAGTAACTTATTATGA 1113 0.3836 MVFPSLPIYLDPTNWSQQQAGIGIETQNPSHLQQPSASTVAGITVKADGCYQGSIRPGSMTDRARMSKIHQTDTGAAGVQKCPRCESTNTKFCYYNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRKNNKRSKGNSVSKMPSKPNRSNDHRRVGIGAIVGGSSSENAKSNGCNNSNVNMGMSHFPTQFPFFPSLHHYNNNDYVSQGIGSMVTKNITNSTNVEFQLGRDSSVGNNNNGDSLLLSNGIGEQWRFLNPLQVHHHQQQPQPQQQQQQQGHNVQQFPFMTNLEPQVGLFQFGGENNGETSRSFISSKAMDSSSASIGMVKMEENNHQRLSLPKNLLSGSGNSNDLFWNEVPSFTPSSSNLL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1295g00001 370 MobiDBLite consensus disorder prediction 126 156 - -
Vivi1295g00001 370 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 71 282 IPR045174 GO:0003700|GO:0006355
Vivi1295g00001 370 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Vivi1295g00001 370 MobiDBLite consensus disorder prediction 262 281 - -
Vivi1295g00001 370 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
Vivi1295g00001 370 MobiDBLite consensus disorder prediction 133 147 - -
Vivi1295g00001 370 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1295g00001 1 137 C2C2-Dof Transcription Factor Family AT2G37590 50.331 1.01e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi1295g00001 zf-Dof 3.2e-32 No_clan