Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1290g00006 CCGAAAAGAATTTCTGGTAATGCTGTTAAAAAGTATAGGGAGAAGAAGAACGCACAGACGGCTTATTTGGAGGAAGAAGTTAAGAAGTTGAAACTTGTGAATCAACAACTTATGAGGAGATTACAAGGGCAGGCACTACTTGAAGCGGAATTGTTAAGGTTGAGGAACACTTTGGTTCAACTTGAGGGAAAAGTTGACTGTGAATTAGGATCATCGTCGTCGTCATCTAAGAGTGAGGAGAAATATTGGTTAAGTGTACTTTTGTTGCTTTATAGGGCACAGATGCAGACGATTACTACGAAAGCGTGTAAGGAGCTTGGTATAAGAGCTCTTCCGAGTAAATGGTGTTTGTCATTACTTTTATGGCTGGAGGAACGTTACGAGACTGTATATACTAAACATCCTGGATTTCAAAAGGGATCCAAGCCTCTTTTGCCATTAGACAATCCCTTTCCCACGAAACTTCCTGACGATCTTTTTGGTGAAAGATGGGCGTTTGTTCAGTTACCTTACTCAGCTGTCCACGAAGAGGCCTCGGCCCCAGAAGAAAGATTTGGCTATGGTTCCGGGCTAGATCTGGATTTATTAGGCATTGAAATCGACGAGAAGACGTTGATCCCAGGACTCGCTGTTGCATCTTCTCGTGCTCAAATATTATCAGCTTTTATGAATGGATTGGAGCTCTGCGCCATCGAAGCAGACACTGCTCGCGCTAACCTGACTCTTTCAGTTGCGATTTCGACTCGGTATGTATACGCGACGTATCAGAAAAGTCCTACTTCGACTAAAGAAGCTGAAGCATGGGAAGCAGCCAAGAAAGCTTCTGGAGGTTTGCATTTCCTTGCAATCCAAGATGAGTTGGATTCTGAAAATTGTGTTGGCTTCTGGCTTTTGCTAGACTTGCCTCCTCCACCTGTATAA 921 0.4354 PKRISGNAVKKYREKKNAQTAYLEEEVKKLKLVNQQLMRRLQGQALLEAELLRLRNTLVQLEGKVDCELGSSSSSSKSEEKYWLSVLLLLYRAQMQTITTKACKELGIRALPSKWCLSLLLWLEERYETVYTKHPGFQKGSKPLLPLDNPFPTKLPDDLFGERWAFVQLPYSAVHEEASAPEERFGYGSGLDLDLLGIEIDEKTLIPGLAVASSRAQILSAFMNGLELCAIEADTARANLTLSVAISTRYVYATYQKSPTSTKEAEAWEAAKKASGGLHFLAIQDELDSENCVGFWLLLDLPPPPV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1290g00006 306 CDD bZIP 8 42 - -
Vivi1290g00006 306 PANTHER - 91 306 IPR009472 GO:0003723
Vivi1290g00006 306 Pfam Basic region leucine zipper 8 50 IPR004827 GO:0003700|GO:0006355
Vivi1290g00006 306 Pfam RNA-binding protein Tab2/Atab2, C terminal 90 298 IPR046761 -
Vivi1290g00006 306 Coils Coil 44 64 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1290g00006 2 73 bZIP Transcription Factor Family AT3G51960 55.405 1.14e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1290g00006 Tab2_like 4.4e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1290g00006 - - vvo:131641042 558.91