Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi128g00027 ATGGCAACACAAAAATCTTTTCTCTCTTCTTCTTCGGCCAAAATTTCTTACGACCCACTCGCGTCGGCTGTTCGTCTTCCTCATTCCTCCTCTGTTCTAATTCAGTTACAACAAATCACTTCTACTAATACCAATTCTAATCCCAATTCTAATTCTCATTCAAATTTAGAAATTGAAAACCCTAAGAAATCACCGTTTTTCCCTTTCTACTCTCCGAGTCCAGCTCACCATTTATTTTCCGACAAGTTTCTGAAAACTACGGCGACTTCGGAGAGGAGATCCTTTAGACCAGCTTCTCCGGCGAAGCACATTAGGTCGCTTCTTGCTCAGCGTCATCGCTCGATTAAGCTGAATGGCTCTAGCATATCGAAAGAGAGTGAGGGTGAAGGTGAAGGTGAAGGTGATGGTGAAGGTGTTTCTCTTGATAAGAATTTCAGATTCTTGAAGAAATTTGGGAGTAAGTATGAGCTTGGTGAAGAGGTTGGTAGAGGACACTTTGGTTATACTTGTTCTGCTGTTATGAATGTTAGTAATAAGGGTGATGTTAAGGGTCATCGTGTTGCTGTTAAGATGACTACTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACATAAGAATTTGATTAAATTTTATGATGCTTATGAAGATCATGATAATGTCTATATAGTCATGGAGTTGTGTGAAGAGGCGAGCTTTTGGATAGAATACAGTCGAGGAGGGAAATATTATGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATATTGTTGCATTTTGCCATCTACAGGGTGTTGTTCATCGTGATCTTAAACCCGAGATATCGCAATTTCATCATCCTTTAGGACAATGTTAG 885 0.3966 MATQKSFLSSSSAKISYDPLASAVRLPHSSSVLIQLQQITSTNTNSNPNSNSHSNLEIENPKKSPFFPFYSPSPAHHLFSDKFLKTTATSERRSFRPASPAKHIRSLLAQRHRSIKLNGSSISKESEGEGEGEGDGEGVSLDKNFRFLKKFGSKYELGEEVGRGHFGYTCSAVMNVSNKGDVKGHRVAVKMTTAIAIEDVRREVKILRALNGHKNLIKFYDAYEDHDNVYIVMELCEEASFWIEYSRGGKYYEEDAKAVMTQILNIVAFCHLQGVVHRDLKPEISQFHHPLGQC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi128g00027 294 FunFam CDPK-related kinase 1 148 240 - -
Vivi128g00027 294 Pfam Protein kinase domain 155 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi128g00027 294 ProSiteProfiles Protein kinase domain profile. 155 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi128g00027 294 Gene3D Transferase(Phosphotransferase) domain 1 147 283 - -
Vivi128g00027 294 ProSitePatterns Protein kinases ATP-binding region signature. 161 190 IPR017441 GO:0005524
Vivi128g00027 294 SMART serkin_6 155 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi128g00027 294 SUPERFAMILY Protein kinase-like (PK-like) 143 283 IPR011009 -
Vivi128g00027 294 PANTHER SERINE/THREONINE-PROTEIN KINASE 142 287 - -
Vivi128g00027 294 MobiDBLite consensus disorder prediction 118 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi128g00027 62 283 EF-hand Containing Proteins AT3G50530 65.690 1.50e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi128g00027 Pkinase 1.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi128g00027 K13412 - vvo:131624999 514.227