Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi128g00025 ATGAATAAGATTTTCGTTCGGTGGTGTCATCGTTTCTTCGTCTTCTTGCTTCTTACAAGGGTTTCCTTAACCTCATCACTCCCACACACTCATAATGGTTACGTAGATTCAGATGGTGCAAGAATTCTGAATCAGGAGCAAGGTGATGTTCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCATTCAAGAGTATTTGACGCCAGTTGTGGAGAAAGAAAAATATAATATCTCAAGAAAGTGCAGACTTCACTCTGAAAATGATATATACAGAGATCAGGAGCAGCATAAATCTCATATAGATATAAATGAGTGGCAGTGTGGATACTGTAAGAAAACTTTCTACGAAGAGAAACATCTCGATCAGCATTTTGATAACAGACACTCCAATTTACTTAATTTGAATGAAAGCCAGTGCTTAGCAGATGTATGTGGAGCATTGCACTGTGACCATGACATCAATTCCAGGTCAAAAAAATCAAAGTGCAATCCTGCTGCAGCAGCAAGAAATAAACATCTATGTGAGACCTTAGCAGACAGTTGTTTTCCGGTTAACACAGGCCCTGCGGCAAGCCGGCTTCATGAATTCTTCTTGCATCAATTCTGTGATGCCCATAGCTGCACTGGAAGTGGAAAGCCTTTCTCCAGAGGGCGCAGGAAAAAGAAAAACGGGTTCTACATTGCTGCCTCCATTTTTCTTGTGACGCTGCTGTTATTTTACTATCTATACATTTATTTATATCAGAGAGGATTGAAAAGGGAAACTCAAATGCTGAAACGTATCTCACAAGCTGGCCGAAAAAAGAAGCCATCTTAA 831 0.3971 MNKIFVRWCHRFFVFLLLTRVSLTSSLPHTHNGYVDSDGARILNQEQGDVHQIHCSRERSRIAWKIIQEYLTPVVEKEKYNISRKCRLHSENDIYRDQEQHKSHIDINEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLNESQCLADVCGALHCDHDINSRSKKSKCNPAAAARNKHLCETLADSCFPVNTGPAASRLHEFFLHQFCDAHSCTGSGKPFSRGRRKKKNGFYIAASIFLVTLLLFYYLYIYLYQRGLKRETQMLKRISQAGRKKKPS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi128g00025 276 ProSitePatterns Zinc finger C2H2 type domain signature. 112 133 IPR013087 -
Vivi128g00025 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 135 IPR013087 -
Vivi128g00025 276 SUPERFAMILY Expressed protein At2g23090/F21P24.15 99 135 - -
Vivi128g00025 276 PANTHER ZINC FINGER PROTEIN-RELATED 21 275 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi128g00025 33 276 C2H2 Transcription Factor Family AT5G63280 58.130 3.04e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi128g00025 None None None