Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi128g00002 ATGTCGAGTTTGCCCCATTATCTGTCTATGAACTCTGCATTCGGTGTTGGTGGTGCTACTGCTCTTTCTCATTCTTCCGTTGCTAACTCTCAATCTCCCGCCGGTAACCGGGATCGGAGCATGGCTTCTTCTGAACAACTCGTTCTCGAACTCAGTACCCCAGAGCTTCGTGAAAATGCTCTTCTCGAACTCTCTAAGAAGAGAGAGCAATTTCAAGATCTTGCTCCCTTGCTATGGAATTCATTTGGCACTATTGCAGCACTTTTGCAGGAAATAGTGTCGATATACCCAGTTCTATCACCACCCAATCTCACTCCTGCACAATCAAATCGAGTGTGCAATGCCCTTGCTCTTCTTCAGTGCGTAGCATCTCACCCGGATACAAGGATGCTATTCCTCAACGCTCATATTCCATTGTATCTGTACCCCTTCCTGAACACCACAAGTAAGTCAAGACCTTTTGAGTACTTGAGGCTGACTAGTCTTGGTGTCATTGGTGCATTAGTGAAGGTCGATGATACCGAGGTTATTAGTTTTCTGCTTTCTACTGAAATAATTCCACTATGCCTGCGCACTATGGAAATGGGGAGTGAGCTCTCCAAAACAGTTGCAACATTTATTGTTCAAAAGATTCTGTTAGATGACGTGGGCTTGGACTACATCTGTACTACTGCTGAGCGTTTCTTTGCAGTAGGTCGAGTTCTTGGAAATATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGCTGAAGCATATCATTCGATGCTATCTTCGCCTGTCAGATAACCCAAGGGCTTGTGATGCACTAAGAAGCTGTCTTCCAGACATGTTAAGAGACGCTACTTTCAGCAGCTGCCTACGTGAGGACCCCACAACTAGGAAGTGGCTGCAACAATTGCTGCACAATGTTGGAGGGAATCGGGTTCCCGCACTTCAAGGTGGAGGAGGTTTTGATCATCTAATGGTGAATTGA 978 0.4611 MSSLPHYLSMNSAFGVGGATALSHSSVANSQSPAGNRDRSMASSEQLVLELSTPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRKWLQQLLHNVGGNRVPALQGGGGFDHLMVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi128g00002 325 SUPERFAMILY ARM repeat 52 280 IPR016024 -
Vivi128g00002 325 Gene3D - 36 306 IPR011989 -
Vivi128g00002 325 FunFam Cell differentiation protein RCD1 38 308 - -
Vivi128g00002 325 PANTHER UNCHARACTERIZED 38 309 IPR007216 GO:0006402|GO:0030014
Vivi128g00002 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Vivi128g00002 Rcd1 1.3e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi128g00002 K12606 - gmx:100784529 578.556