Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1286g00003 ATGAGTTCCTTCCAAGTTATCTCCACCACTATAATTCATGCACAAAATCACTCAAATGATCGTACAATCGATCTAACACCATGGGATCTACAATTCCTCCCATATGGAGTCAACCAAAAGGGCCTTCTTTATCACCACCCTTGCAAATTAGATACCACAAATCAAATTCAACGCCTCAAACACTCTCTTTCCACTACCCTTGAATTTTTTCCACCTTTCACAGGTCGTCTCAAAATCACGGAACACGAAGATAACACTATCTCATGTTCTATACTGTGTAACAACGAAGGTGCACTCTTTATTCACGCCGAAGCAAAAAATATTAGTGTTTCCGACATTCTTGAACCTATTTATCTTCCTCGTGTTGTATACTCAATTTTTCCACTTGGCAAAGTCAAAAACTATGAAGGGACATCACAACCATTACTTGCTGTCCAAGTAACAGAGTTAACTGATGGCATCTTTATTGGTTGTACAGTCAACCATGTGGTCGCTGATGGTAACTCAATTTGGCACTTCATCAATTCATGGGCCGAAATTTCAAAGGGGGCTCTTCAAATATCGAAAACCCCATCATTCGAACGATGGTTTCCAAAAGGTACTCAACTTCCCATTCGATTTCCTTTCTTAGTGGAACCACAAAATAATCACTCTAATGATGATAATGATGAAGAAGAATCACTCAACCACTCAGAGAGAATGTTTCATTTTACAAAAGAGAATATTGCAAAACTAAAATTCAAAGCAAACTTAGAGACTGGTACAAAGAACATATCTTCATTGCAAGCAGTTTTCACTCACATTTGGCGCTCTGTTATACGTTGCAAAAACCTTGACCCGCAAGAAAAAGTTAATTATATGATGGTTATAGGCGTTAGGCCAAGGTTTATTCCTCCGTTGCAAAAGAATTATTTTGGTAACGCTGTCATAGATTGTGAAGTTACCATGAAAGTTTGTGAATTGTTGGACAACAATGGACTTGGTAAAGGTGCTTGGGAGATGAACAAGATAATTGCTTTGTACTCTGACGAGAAATTGAAAAGTCGTTATGAAAATTGGTTAATAACTCCTAGTTTTGCTCGCCATGGTGTTGTGGCAAATAGTAATTCATTGGCGCTTGGTAGTTCGCCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCAGTGACAGTTCGAAATGGAGGTGCGAATAAAAGAAATGGAAAGATTTATGTGTGTGCTGGTGCAGAAGAAGGTAGTATGAATTTTGAAGTTTGTCTTCCTTATGATATTTTGGAAGCAATTGGAAATGATTCTGAATTTATGGATGTTGTGTCTAGCTAA 1332 0.3784 MSSFQVISTTIIHAQNHSNDRTIDLTPWDLQFLPYGVNQKGLLYHHPCKLDTTNQIQRLKHSLSTTLEFFPPFTGRLKITEHEDNTISCSILCNNEGALFIHAEAKNISVSDILEPIYLPRVVYSIFPLGKVKNYEGTSQPLLAVQVTELTDGIFIGCTVNHVVADGNSIWHFINSWAEISKGALQISKTPSFERWFPKGTQLPIRFPFLVEPQNNHSNDDNDEEESLNHSERMFHFTKENIAKLKFKANLETGTKNISSLQAVFTHIWRSVIRCKNLDPQEKVNYMMVIGVRPRFIPPLQKNYFGNAVIDCEVTMKVCELLDNNGLGKGAWEMNKIIALYSDEKLKSRYENWLITPSFARHGVVANSNSLALGSSPWFDVYGNDFGWGKPVTVRNGGANKRNGKIYVCAGAEEGSMNFEVCLPYDILEAIGNDSEFMDVVSS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1286g00003 443 Gene3D - 4 204 IPR023213 -
Vivi1286g00003 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 438 - -
Vivi1286g00003 443 Gene3D - 211 432 IPR023213 -
Vivi1286g00003 443 Pfam Transferase family 5 438 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1286g00003 44 423 Monolignol Biosynthesis Gene Families AT5G48930 25.064 3.27e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1286g00003 - - psat:127075665 536.569