Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1285g00001 ATGACGATAGTATTGTTTGATAGAGAAGAAGATGCCTATTGGTGGATTCTATGTTTGGAGAAATTTTTCAAGGAGCATGAAACACCCAAATCATTGAAGATTTTAAAAGCTATTGGAGCATTGAAAGAGTATGCTGCAGCGGTTGTTCATGCTGTGAAGGATGTATGTAATCGTCGGAACGTGAAGCACCATGTGATTTGCAGCGAGAGTGGTAGGGCCATTGTGTCTTATCATTCAATTTTGATTTTTGAGGCTATTGGTGCAACACTTAGAGGGTATCTCCAACACCGTGGCCAAGAAGGCGCAGGAATAGTCACCGTGAATAACAACATCCTTCAATCCATCATCGGCGTTGGTCTTGTTTCCGATGTCTTCAACGAATCTATGCTCGATCAGTTACCCGGAAGCTTAGCTATTGGCCATGTTCGTTATTCCACTGCTGGACAATCCATGCTGAAAAACGTTCAACCTTTCGTTGTTGGGTACCATTTTGGTTCTGTTGGGGTTGCTCATAACGGTAATTTGGTTAACTATCGCACTTTGAGAGCTAAGCTTGAAGAAAAATGTTCAATTTTTAACACTACTTCTGATACTGAAATTGTACGATCAGAAATTGTTCTTCATTTGATTGCTACTTTAAAGCATAGACCTTTTATATTGAAAATTATTGATGCATGTGAGAAGATTAAAGGGGCTTATTCTATTGAGTTTGTTATGGAGGATAAGCTTGTTGCTGTGAGAGATCCTTTCGAGTTTCGACCTTTGGTTATGGGGAGGAGAAATAATGGTGTGGTTATTTTTGCTTCTGAGACTTGTGCTCTTGATTCAATTGAAGCTACTTATGAGAGGGAAGTGTTCCCTAGTGAGGTTGTTGTGGTTGACGATAATGGGATTCAATCTCTTTGTCTCATGTCTCATCCACAGCCGAAGCAATGTATTTTCGAGCATATTTACATTGTTTTGCCTAATTCTGTTGCTTTTGGTAGGTCTGTGTACGAGTCGCGTAGACGATTCGGTGAGGTGCTTCCTACTGGTCAACCGTGGTCGTCCTTAATTGGTTGCAGCAGTGAATTGGCAGTGTTTTATGAAAATGGCCCTTTCGAAATTGCCAACAAGATGTCCCTTACATGGAACGAATATGATTGGGACAAGGCAATTTTTGCTGCACATCCTGAATATGCTACACATGATATTTTTGTAACGGGTGAATCATATGCTGGGCACTATGTTCTGGTTTTTACTGCTCGTGTCCACAAGGGAAGCAAAGCTAAAGAAATAATTCATATAAACTCGAAGGGATTTGCCATTGTTAATGGGTTCACTAATTTTGGAATTCATTATAAAGCTTATGCAGATTATGTACTTGACATGGGCATAATTGAACAGCCTGACTATGACAGCATCAACAAAGTGTTGGTTCCAGCCCACGAATTGGCAATCAAACTATGCGGTACAGATGGAAAAATCTCGTGCACAACTTCATATTTTGTTTGTAATACTATATTCATTCCCATCATGTCACATGCTACACATATCAATTACTACGACATCAGAAAAAAGTGTGGAGGGATTCTTTGCTATGATTTTTCGAACAAGGAAAAGTTCCTGAACCAAGGATTTGTTCGGGATGCACTAGGGGTTGGAGATATTGATTTTGTGTCTTGCAGCTCTATAGTTTATCAGGCTATGCTAGTGGATTGCAGGTATGTATTCATTATTCTAATATTAGCTGGCATTATTCTGATACCGGTTCTTCTACTTGTTGCTTTAACGAATGGTGGTGGGAAGAAACAAACAGTTAGCAAAGCAACTTTCAATGAACTTGGCGAGTTATCAATGGGAAACATCACAGCAAGTAGTGCAAGGTTGTGGGCGTGTTTTAATACCTGCTATTGGATTTCACTTGTTTCATTATTCTTCTTATGGAAGAAGCGTGCCTGTGCCGAAGCAATATATGTAGGTTCAAAAACAACTGCGCTAAACCAGAAGGTACAAGACCAACCAACGAGACTAGCTGTCTTGGAATTATTGGAAAGAAAAAAAAGTGGACAACATAGAGTATTGCCATGA 2070 0.3976 MTIVLFDREEDAYWWILCLEKFFKEHETPKSLKILKAIGALKEYAAAVVHAVKDVCNRRNVKHHVICSESGRAIVSYHSILIFEAIGATLRGYLQHRGQEGAGIVTVNNNILQSIIGVGLVSDVFNESMLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVVGYHFGSVGVAHNGNLVNYRTLRAKLEEKCSIFNTTSDTEIVRSEIVLHLIATLKHRPFILKIIDACEKIKGAYSIEFVMEDKLVAVRDPFEFRPLVMGRRNNGVVIFASETCALDSIEATYEREVFPSEVVVVDDNGIQSLCLMSHPQPKQCIFEHIYIVLPNSVAFGRSVYESRRRFGEVLPTGQPWSSLIGCSSELAVFYENGPFEIANKMSLTWNEYDWDKAIFAAHPEYATHDIFVTGESYAGHYVLVFTARVHKGSKAKEIIHINSKGFAIVNGFTNFGIHYKAYADYVLDMGIIEQPDYDSINKVLVPAHELAIKLCGTDGKISCTTSYFVCNTIFIPIMSHATHINYYDIRKKCGGILCYDFSNKEKFLNQGFVRDALGVGDIDFVSCSSIVYQAMLVDCRYVFIILILAGIILIPVLLLVALTNGGGKKQTVSKATFNELGELSMGNITASSARLWACFNTCYWISLVSLFFLWKKRACAEAIYVGSKTTALNQKVQDQPTRLAVLELLERKKSGQHRVLP 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1285g00001 689 ProSitePatterns Serine carboxypeptidases, serine active site. 400 407 IPR018202 GO:0004185
Vivi1285g00001 689 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 67 296 IPR017932 -
Vivi1285g00001 689 Pfam Serine carboxypeptidase 387 565 IPR001563 GO:0004185|GO:0006508
Vivi1285g00001 689 Pfam Serine carboxypeptidase 353 385 IPR001563 GO:0004185|GO:0006508
Vivi1285g00001 689 SUPERFAMILY alpha/beta-Hydrolases 353 563 IPR029058 -
Vivi1285g00001 689 Pfam Glutamine amidotransferase domain 151 275 IPR017932 -
Vivi1285g00001 689 Gene3D alpha/beta hydrolase 384 571 IPR029058 -
Vivi1285g00001 689 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 82 377 IPR029055 -
Vivi1285g00001 689 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 92 318 IPR029055 -
Vivi1285g00001 689 CDD GPATase_N 94 325 IPR035584 -
Vivi1285g00001 689 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 93 346 - -
Vivi1285g00001 689 Pfam Late exocytosis, associated with Golgi transport 567 643 IPR032880 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1285g00001 94 347 PRT Gene Family AT4G34740 74.118 7.19e-129 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1285g00001 K00764 - gmx:100791919 426.402