Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1281g00006 ATGGGAATCAATAAGCTTGAGGATCTATGGTTGCTACAACATGACATCACGACACCCAACCTATCAACAAGTCAAGCGGAATTCCTACTACGTTTGCACAGAGATCTTGAACGTGTACCAATTAACAATGAAAGGTGTTTCGCCAATGTCATCAGGGGCATTCGCCGTGTTTCACATAAGACAGTTGCTATCAAGATTCTAACCATTCCTCAACACAAGCAAAAATACGGAACTCCATCCACCATTTTGAAGCACACCTCTCTCCTTAAAGATTTGAACCATCCCAATATCATCAGCTTGTTGCAAACTCTGGCTACTGACGAAGAAGTGTTTCTTGTTTTTGATCATGTTGACCTAAATCTTGAAAAATACATCACCAATCCCGTGCTTAGCCTTCACACTTTCGAAAGATGTGTTCTACGTCAAGCTGTTTCTGCACTCGCGTACCTCCACTCTCACCAAATTGTACACAAAGATATCAATCCTTTTAATATTCTCTTGCAATACCAATGGGGTGGCTCTCCTATAGTCAAGCTATGTGGTATTCCTGCACCCAAAACTTCTATTCATACGCCTCATCCTAGCTATACAGCACCTGAACTTTTGATGGGCTCAACCAAGTACTCAACTGCAGCTGATATCTGGTCTATGGGCTGCATATTTGCTCACATCGTTAAGAGCCGACCGCTGTTCAATACTATGGACAAGCATAGGGTATTGGCTGAGATATTCTGGTTGTTTGGTACCCCAACAGAAGAAACTTGGCCTGGCGTGTCTTCACTATGGAATATTCGAGAATTTAACCCTCCAATACAGCCAAAGGATCTGGCTCAAGAGTTCCCAAGCCTCGAACCTGCTGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTGTGCCCAAATCGAAGGATTTCAGCTTATGAAGCTATTGACCATCCATATATCTTCGACGTTGACCATCCATGA 963 0.4299 MGINKLEDLWLLQHDITTPNLSTSQAEFLLRLHRDLERVPINNERCFANVIRGIRRVSHKTVAIKILTIPQHKQKYGTPSTILKHTSLLKDLNHPNIISLLQTLATDEEVFLVFDHVDLNLEKYITNPVLSLHTFERCVLRQAVSALAYLHSHQIVHKDINPFNILLQYQWGGSPIVKLCGIPAPKTSIHTPHPSYTAPELLMGSTKYSTAADIWSMGCIFAHIVKSRPLFNTMDKHRVLAEIFWLFGTPTEETWPGVSSLWNIREFNPPIQPKDLAQEFPSLEPAGLDLLSKMLCLCPNRRISAYEAIDHPYIFDVDHP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1281g00006 320 PANTHER CELL DIVISION PROTEIN KINASE 44 314 - -
Vivi1281g00006 320 Pfam Protein kinase domain 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1281g00006 320 ProSiteProfiles Protein kinase domain profile. 36 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1281g00006 320 SUPERFAMILY Protein kinase-like (PK-like) 47 317 IPR011009 -
Vivi1281g00006 320 Gene3D Transferase(Phosphotransferase) domain 1 131 319 - -
Vivi1281g00006 320 Gene3D Phosphorylase Kinase; domain 1 48 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1281g00006 37 317 Core Cell Cycle Gene Families AT3G48750 36.332 8.79e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi1281g00006 Pkinase 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1281g00006 K02206 - psat:127128144 444.506