Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1281g00005 ATGGGAATCAATAAACTTGAGGATCTATGGTTGCAACAACATGACATCATGATACCCAAGCTATCAATAAATCAGGCGGAATACCTACTTCGCTTTCACAAAGATCTTGAACGGATACGAATTGACAATGATATGTGTTTCTCCAATGTCATCAAGTGCATTCGACGTTCTTCAGATGAGACAGTTGCTATCAAGATTCTAACCATTCCTCAACACCAGCAAAACAACGGAATTCCATCCACCATTTTGAATCACGCCTCTAGCCTCAGAGATTTGAACCATGACAATATCGTCAGGTTGTTGCAAATTCTGTCTACTGAGGAAGATGTGTATCTTGTTTTTGATCATGTTGACCTAAATCTTGAAAGATACATCACCAATCACTTGCCTAGCATTGCCACTTTCGAAAGATGTGTTCTATATCAAGCTCTTTCGGGACTCACATACCTCCATTCTCACCACATTGTACACACCGATATCAATCCTTTTAATATTCTCGTTGAATGCCACCTAGATGATGAATCATCTCCTACAGTCAAGCTATGTGGTATTCCTGCACCCAAAACTTCTATTCATAAGGCTCGTCCTAACTATACAGCACCTGAACTTTTGATGGGCTCAACCAATTACTCAACTGCAGCTGATATCTGGTCTATGGGCTGCATATTTGCTCACATCATTAAGCGCCGACCTCTGTTCAATAATTTAGACGAGCATGGGGTATTGGCTGAGATATTCTGTTTGTTTGGCACGCCAACAGAAGAAACTTGGCCTAGAGTGTCTTCTATATGCAATTTTCTTCAAGAATTTAACCCTCCAGTACAGCCAAAGGACCTGGCTAAAGAGTTCCCAAGCCTCGGACCTACTGGTCTTGATCTTCTTTCGAGAATGCTTTGCCTGTGCCCAAATGGCAGGATTTCAGCTAATGAAGCTCTTGACCATCCATATCTTCAGCTGTTCTCAAATGGCGAGATTTCACCTTATGAAGCTCTTGCCTATCCATTTTGA 1008 0.4157 MGINKLEDLWLQQHDIMIPKLSINQAEYLLRFHKDLERIRIDNDMCFSNVIKCIRRSSDETVAIKILTIPQHQQNNGIPSTILNHASSLRDLNHDNIVRLLQILSTEEDVYLVFDHVDLNLERYITNHLPSIATFERCVLYQALSGLTYLHSHHIVHTDINPFNILVECHLDDESSPTVKLCGIPAPKTSIHKARPNYTAPELLMGSTNYSTAADIWSMGCIFAHIIKRRPLFNNLDEHGVLAEIFCLFGTPTEETWPRVSSICNFLQEFNPPVQPKDLAKEFPSLGPTGLDLLSRMLCLCPNGRISANEALDHPYLQLFSNGEISPYEALAYPF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1281g00005 335 Pfam Protein kinase domain 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1281g00005 335 ProSiteProfiles Protein kinase domain profile. 36 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1281g00005 335 SUPERFAMILY Protein kinase-like (PK-like) 47 318 IPR011009 -
Vivi1281g00005 335 Gene3D Transferase(Phosphotransferase) domain 1 135 326 - -
Vivi1281g00005 335 PANTHER CELL DIVISION PROTEIN KINASE 47 317 - -
Vivi1281g00005 335 Gene3D Phosphorylase Kinase; domain 1 48 118 - -
Vivi1281g00005 335 FunFam Mitogen-activated protein kinase 134 333 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1281g00005 37 318 Core Cell Cycle Gene Families AT3G48750 36.486 5.69e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi1281g00005 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1281g00005 K02206 - psat:127128144 473.011