Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi127g00030 ATGAAACTTCACTCCTCTCTTCTCTTCTTTTCTTCCATCTTCCATTTCTATACTCTTTCTTCTTCACTCAACTCAGATGGCTTAGCACTTTTATCATTCAAATCCCACTGGACATCACTTCCTCCTCTCATAAACTCAACATGGAACCCATCTCATTCCACACCATGTTCATGGGCTGGTCTCAAATGCAACTCTTTCCACCGTGTAATCTCTCTCAACCTTTCCTATCTTGATATCTACGGTCAACTAGGGCCAGAAATTGCAAACTGCACACAACTCCAACACTTAGACCTTAGGTATAACTACTTTCATGGCCAAGTACCTCACTCTTTCACTAACCTCCATCAACTAAAATATCTTCACCTTTCTACTAATCTTCTCACAGGTCCTTTCCCTCATTTCTTGTCCCAAATCCCTCACCTCAAACTTCTTGATCTCTTTGATAACCAACTCAACGGTTCCATTTCAACTACTATTGCCAACATAACTCATCTCCAAGAATTGTATCTCCAATATAACAACTTCTCTGGTGCAATTCCTTCATCTATTGGGAACTGTACTCAATTACAAGACTTGTATTTGAATGTTAATCAGTTGGAGGGTGTTCTTCCTTATAGTCTCAACAATCTCAATCATCGTGTTCGTTTTCAAGTTGCCTACAATAAACTAACAGGTACTATTCCATTGGGTTCTTCCGGTTGTAGAAATTTACTGTTTTTGGATATCTCATTCAATGATTTTGGTAGTAGCGTTCCATATGGCATTGGTAATTGTACTGGTTTATCACAATTTGCTGCTGTGAATTCTAACTTGGTTGGAGCTATTCCATCTTCCATTGGTCTGCTCACCAAGCTTTCGATTCTTCGCCTTTGCAAGAATCATTTGTCTGGTAAAATACCTCCTGAAATAGGCAACTGTAAGTCTTTGACTGAGTTGCATTTGTATTCCAATCGACTTGATGGAAAAATTCCGAGTGAATTGGGAAAACTCAGTGAATTAAGGGACCTTGAACTGTTTTCTAATCAATTGAGCGGCGAAATTCCGCTTGAGATATGGAAGATTCGAGGTCTCGAGCATCTGTTTGTGTATAATAATAGCCTTTCTGGTGAACTTCCAGTGGAGATGACAGAGCTGAAGAACCTTAAGAACATTTCATTATTTAACAACATTTTCTCTGGAGTGATACCTCAAAGCTTAGGAATTAACAGCAGTTTGGTACAGTTGGACTTTGTGAATAACAGGTTCACTGGTAACCTTCCTCCAAATCTTTGTTTTGGAAGAAAGTTGAATGTTCTGAATATGGGAATCAATCGACTTCGAGGAAGAATACCTCTCGATGTTGGAAGATGCACAACTTTAAGAAGGGTCATTCTTAAACAAAACAAATTTACCGGGCCTCTTCCTGATTTTGAAAGGAATACCAATCCGTTATACATGGAGATCAGCCACAACGAGATCAACGGGTCAATTCCATCGAGTTTAGGAAACTGCACGAATCTCACGGATTTAATGTTGTCCGCGAACAAACTTAGCGGGCGTATACCACCGGAGTTGGGAAAACTTGTTAATCTTCGGACATTGGATCTTGGTCATAATGACTTAGAAGGTCCTTTGCCTTTTCAGCTCGCAAACTGTACCAAAATGGACAAGTTTGATGTGGGATTTAACTTCCTGAATGGTTCATTGCCGTCGAGTTTGCAGAAGTGGACAAAGCTAAACACACTAATTTTGAATGAGAATTATTTTAGTGGTGGAATTCCAGAGTTTTTGTCGGCTTTTGAAGATCTTTCTGAACTACAGCTTGGCGGAAATATGTTTGGAGGGGAAATTCCTAACTCGGTTGGGACATTGCAGAATTTGATCTACGGGTTGAATCTAAGTTCTAATGGGCTGATAGGAGACATACCTGTGGAAATTGGAAAGTTGAAATCCTTACAAATGATTGATCTTTCTCAAAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCGTTAGTCGAAATCAATCTTTCGAACAATTCTTTTCAGGGTTCCATACCGAAGATGCTAATGAAGCTGTTTAATTCACGCTTGTCCTCATTTTCGGGGAATCCCGGGCTATGTATCAGTTGTTCACCATCCAGTGGTTTGGTTTGCAACGAAAGCAGCTATGTAAAACCATGTGACAACAACAACAAAATGAATAACCAAGGCCTCAGTAAAATTGTGATTGTGATGATAGCTATAGGATCCTCAATATTTGTTGTTTTGCTGTTGATGGGATTGGTTCATATATTTGTTGGCAGAAAATCTAACCAGCAAGTCCATATTACCGATGACGAAGGTCGTTTGTCCCTTCTTAACAAAGTGATGGAGGCTACATCGAACCTAAGTGATCGGTATATTATCGGCAGAGGAGCCCATGGAGTTGTCTATAAAGCCAATGTAAGTCAAGACAAAGCTTTTGCCATAAAGAAGCTGGCATTTGCTGCCAGCAAAGATAAAAACTTGAGCATGGTTAGAGAAATTCAAACCCTCGGACAAATCAAGCATCGAAATCTTGTCAAATTGGAAAACTTTTGGTTGAGACATGATTACGGTCTAATTATGTATAGCTACATGCCAAATGGAAGCCTTTATGATGTCTTGCATGAAAAGAAGCCAGCGCCGTCTTTAGAGTGGAATGTTCGGTATAAGATAGCTATTGGAATCGCTCATGGGTTGTCTTACCTCCATTATGACTGCGATCCTCCCATAGTGCACCGAGATATCAAACCAAACAACATACTTCTAGACTCTGATATGGAGCCTCACATCGCAGACTTCGGTATTGCCAAACTTTTGGACCAGTCCTCTACATCAAATCCTTCCTTATCTGTGCCTGGCACAATCGGTTATATTGCACCAGAGAACGCTTATACAACGGTAAGTAATAGGGAGTGTGATGTATACAGCTATGGAGTAGTTTTGCTTGAGCTGATAACGAGAAAGAAGGTAGTAGATCCATCGTTTACGGAGGGTACTGATTTAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAATGAGTGTCTAGATACCAATATGATGGAAAATGTTGCAAAAGTGCTTATGATGGCTTTGAGATGTGCTGAGAATGATCCACACAACAGGCCCAAAATGACAGATGTTACTAAGCAGTTATCAGATTCAAATCCACAGAAAAAAAAAGTAAGAAGGGCTCGTTTTGTAAAAGATTTCTAA 3267 0.3976 MKLHSSLLFFSSIFHFYTLSSSLNSDGLALLSFKSHWTSLPPLINSTWNPSHSTPCSWAGLKCNSFHRVISLNLSYLDIYGQLGPEIANCTQLQHLDLRYNYFHGQVPHSFTNLHQLKYLHLSTNLLTGPFPHFLSQIPHLKLLDLFDNQLNGSISTTIANITHLQELYLQYNNFSGAIPSSIGNCTQLQDLYLNVNQLEGVLPYSLNNLNHRVRFQVAYNKLTGTIPLGSSGCRNLLFLDISFNDFGSSVPYGIGNCTGLSQFAAVNSNLVGAIPSSIGLLTKLSILRLCKNHLSGKIPPEIGNCKSLTELHLYSNRLDGKIPSELGKLSELRDLELFSNQLSGEIPLEIWKIRGLEHLFVYNNSLSGELPVEMTELKNLKNISLFNNIFSGVIPQSLGINSSLVQLDFVNNRFTGNLPPNLCFGRKLNVLNMGINRLRGRIPLDVGRCTTLRRVILKQNKFTGPLPDFERNTNPLYMEISHNEINGSIPSSLGNCTNLTDLMLSANKLSGRIPPELGKLVNLRTLDLGHNDLEGPLPFQLANCTKMDKFDVGFNFLNGSLPSSLQKWTKLNTLILNENYFSGGIPEFLSAFEDLSELQLGGNMFGGEIPNSVGTLQNLIYGLNLSSNGLIGDIPVEIGKLKSLQMIDLSQNNLTGSIQVLDELPSLVEINLSNNSFQGSIPKMLMKLFNSRLSSFSGNPGLCISCSPSSGLVCNESSYVKPCDNNNKMNNQGLSKIVIVMIAIGSSIFVVLLLMGLVHIFVGRKSNQQVHITDDEGRLSLLNKVMEATSNLSDRYIIGRGAHGVVYKANVSQDKAFAIKKLAFAASKDKNLSMVREIQTLGQIKHRNLVKLENFWLRHDYGLIMYSYMPNGSLYDVLHEKKPAPSLEWNVRYKIAIGIAHGLSYLHYDCDPPIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSNPSLSVPGTIGYIAPENAYTTVSNRECDVYSYGVVLLELITRKKVVDPSFTEGTDLVGWVRLLWSETGEINQIVDSSLANECLDTNMMENVAKVLMMALRCAENDPHNRPKMTDVTKQLSDSNPQKKKVRRARFVKDF 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi127g00030 1088 SUPERFAMILY L domain-like 23 297 - -
Vivi127g00030 1088 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 760 869 - -
Vivi127g00030 1088 ProSitePatterns Protein kinases ATP-binding region signature. 799 822 IPR017441 GO:0005524
Vivi127g00030 1088 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vivi127g00030 1088 ProSiteProfiles Leucine-rich repeat profile. 644 666 IPR001611 GO:0005515
Vivi127g00030 1088 Pfam Protein kinase domain 798 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi127g00030 1088 Gene3D Transferase(Phosphotransferase) domain 1 870 1086 - -
Vivi127g00030 1088 SUPERFAMILY Protein kinase-like (PK-like) 775 1069 IPR011009 -
Vivi127g00030 1088 MobiDBLite consensus disorder prediction 1057 1076 - -
Vivi127g00030 1088 ProSiteProfiles Protein kinase domain profile. 793 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi127g00030 1088 Gene3D Phosphorylase Kinase; domain 1 759 869 - -
Vivi127g00030 1088 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 323 - -
Vivi127g00030 1088 SMART serkin_6 793 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi127g00030 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 427 713 - -
Vivi127g00030 1088 FunFam Serine/threonine-protein kinase-like protein CCR4 870 1086 - -
Vivi127g00030 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Vivi127g00030 1088 Gene3D Ribonuclease Inhibitor 180 277 IPR032675 -
Vivi127g00030 1088 SMART LRR_typ_2 330 354 IPR003591 -
Vivi127g00030 1088 SMART LRR_typ_2 521 545 IPR003591 -
Vivi127g00030 1088 SMART LRR_typ_2 162 186 IPR003591 -
Vivi127g00030 1088 SMART LRR_typ_2 187 209 IPR003591 -
Vivi127g00030 1088 SMART LRR_typ_2 665 689 IPR003591 -
Vivi127g00030 1088 SMART LRR_typ_2 282 306 IPR003591 -
Vivi127g00030 1088 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 523 1070 - -
Vivi127g00030 1088 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 325 423 - -
Vivi127g00030 1088 FunFam Leucine-rich repeat receptor-like protein kinase 23 181 - -
Vivi127g00030 1088 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Vivi127g00030 1088 Pfam Leucine rich repeat 624 677 IPR001611 GO:0005515
Vivi127g00030 1088 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Vivi127g00030 1088 Pfam Leucine rich repeat 480 534 IPR001611 GO:0005515
Vivi127g00030 1088 Gene3D Ribonuclease Inhibitor 288 450 IPR032675 -
Vivi127g00030 1088 Gene3D Ribonuclease Inhibitor 451 712 IPR032675 -
Vivi127g00030 1088 SUPERFAMILY RNI-like 270 698 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi127g00030 21 1071 Receptor kinase-like Gene Family AT1G73080 50.230 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi127g00030 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi127g00030 - - gmx:100778035 1459.51