Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi127g00029 ATGAGGAAGAGTGGCATTATGAAAGCTGGAGAGGTTCCGAGTCGATTGACTCGTGCTCGAGCTGCTGCTTTAAGTGCAACTGGACAGTTGCCACCATTGAAGAAGGTGGCAGAAGAAAGTCAGAAGCATCCCTTAAGAGCCAATTCGAAAAGAGCGGTTTCAGATGATACGTATCTGCCGCATAAGAAGAGGGCGATTCTTCATGATGTCACGAACGTTCGCTGTGAGAAAAGTAATAGGAGCTGTTTAAATCCAACTGAAACTCAGGCTAAGAAAAGAAAGCTGAATAAGCCCGCTCAACCCGGTGTTTCAAAGGAGGTTCCATTAGTTGCTGACTCAAAACCGGTGAAATTACCTGAAATGCGGCTTAGATCATCAGAAGATGTCACATGTTCAGTTAAGTTGGAAGACAATGAACCGATTAGGCTGAGTGCCAACCACTGTGCTACAAATAACGATCTGCTTCACAGCCAGACATCTCGAGTATCTGCTCAGCCTTCGATTTCTCAAAAGAAAGCTTCACAAACTGTTGCGGCCGAGAAAGGCAACATTTCTGAACTTTTGGATGTGTCAAAGCATCCAGATGTTGCTGACATAGATGCTGATTTTGAAGATCCTCAACTTTGCAGCCTCTATGCTGCAGATATATACGACCACATGCGTGTTGCTGAGCTGTCGAGAAGGCCTAATCCCAACTTAATGGAAACAGTACAACAAGATATCACTCCAAGCATGCGCGGTATACTGGTTGATTGGCTTGTAGAGGTTTCTGATGGATACAAATTGCAAGCAAATACTCTTTACCTCACTGTATATCTCATTGATTGGTTTCTCTCAAAAAATTTCATTGAAAGACAGAAACTTCAGTTGCTCGGCATCACTTGCATGCTAATTGCCTCAAAGTATGAAGAAATTAACGCCCCCCATGTTGAAGACTTCTGCTTCATCACGGACAACACATACACAAAAGGCCAGGTACTACAGATGGAGTCTCTAGTGTTGAAGTCCGCTGCATATCAACTATTTGCTCCTACTACAAAAACTTTCCTCAGGAGATTTCTTCGAGCCGCACAAGCTTCTTACAAGAGACCGAGCATTGAGTTGGAGTACTTGGCGAATTACCTGGCGGAACTAACATTGATGAGCTATGGTTTCTTAAATTTCCTTCCTTCAATGATTGCTGCATCTGCGGTTTTCCTCGCAAGATGGACATTAGATCAGTCAAACCACCCATGGAATCCAACTCTTGAACACTATGCTTCTTACAAAGCATCAGATTTGAAAGCCGCGGTTCTTGCATTACAAGATCTACAACTGAATAGCAATGACTGTCCTTTAACCTCGATCCGCATGAAGTACACACAAGACAATCTCAAATGTGTAGCAACTTTGTCTTCACCAAAATTGCTTGAAACAATGTTTTGA 1425 0.4302 MRKSGIMKAGEVPSRLTRARAAALSATGQLPPLKKVAEESQKHPLRANSKRAVSDDTYLPHKKRAILHDVTNVRCEKSNRSCLNPTETQAKKRKLNKPAQPGVSKEVPLVADSKPVKLPEMRLRSSEDVTCSVKLEDNEPIRLSANHCATNNDLLHSQTSRVSAQPSISQKKASQTVAAEKGNISELLDVSKHPDVADIDADFEDPQLCSLYAADIYDHMRVAELSRRPNPNLMETVQQDITPSMRGILVDWLVEVSDGYKLQANTLYLTVYLIDWFLSKNFIERQKLQLLGITCMLIASKYEEINAPHVEDFCFITDNTYTKGQVLQMESLVLKSAAYQLFAPTTKTFLRRFLRAAQASYKRPSIELEYLANYLAELTLMSYGFLNFLPSMIAASAVFLARWTLDQSNHPWNPTLEHYASYKASDLKAAVLALQDLQLNSNDCPLTSIRMKYTQDNLKCVATLSSPKLLETMF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi127g00029 474 MobiDBLite consensus disorder prediction 36 54 - -
Vivi127g00029 474 SMART Cyclin_C_2 344 467 IPR004367 -
Vivi127g00029 474 Gene3D - 229 342 - -
Vivi127g00029 474 MobiDBLite consensus disorder prediction 79 104 - -
Vivi127g00029 474 SMART cyclin_7 348 436 IPR013763 -
Vivi127g00029 474 SMART cyclin_7 251 335 IPR013763 -
Vivi127g00029 474 CDD CYCLIN_AtCycA-like_rpt2 344 455 - -
Vivi127g00029 474 Pfam Cyclin, C-terminal domain 344 466 IPR004367 -
Vivi127g00029 474 SUPERFAMILY Cyclin-like 344 469 IPR036915 -
Vivi127g00029 474 PANTHER CYCLINS 161 431 IPR039361 -
Vivi127g00029 474 Gene3D - 215 463 - -
Vivi127g00029 474 FunFam Cyclin A1 331 463 - -
Vivi127g00029 474 Pfam Cyclin, N-terminal domain 215 340 IPR006671 -
Vivi127g00029 474 SUPERFAMILY Cyclin-like 204 340 IPR036915 -
Vivi127g00029 474 PIRSF Cyclin_A_B_D_E 15 473 IPR046965 GO:0016538|GO:0044772
Vivi127g00029 474 MobiDBLite consensus disorder prediction 25 54 - -
Vivi127g00029 474 FunFam Mitotic cyclin 6 229 329 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi127g00029 1 474 Core Cell Cycle Gene Families AT1G80370 51.240 4.40e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi127g00029 K06627 - gmx:100793657 590.882