Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi127g00016 ATGGAAGATGATGAAATTAAAGCACACACACCTTATATTGATGGTAGCCTTCATGAATGCCTAGCACTTACCACAGACCATATGCCCAGACCTAAGAAACCATCGATAAAGTTTAAGGAATTACCTAAGAATATGAGATCTGAATTTCTTGATAAGGAACTAAAGCGTCCAGTTATAGTAAATGACATGATGTTTGTTCCTTGGTTGAAAAAATTGCTATCAATCACTACATTTTTCACCTTATGTGAAGTTCACCCAAACGTGCCAAAAAATGAGTGCAACATGTTTTGCCTCGATTGCAATGATAATCCGTTTTGTGGTTCTTGCATCACTTCTGGTCACAAAGATCACAATGTAATTCAAATACGGAGGTCTTCCTATAACGACGCAGTTAGGACCACTGATATTTATAAGTTTGTGGACATTCTTGGAATTCAAACCTACATGATAAATAACTCTACAATCGTCTTCATTAACAAGAGAGATCGTAGTCATCCGAAGAGAAACAATGTTAGTAATTTCGGTTACATGAGTGATTCTCTTTGCAAGATTTGCAAAAGAAATCTAGTGGACCCTACTTACTTCTGTTCTTTGGAATGTAAGTTTGCTTGGATAGAAAAGGAAGGAGGTTTTTTCGTAAGTGCAAAAGAGAAGAAGGAATTGGAATTTTTGTTAGAAAAATCCATCAAAGTGATACCACCAAAAGGAAAGACAAAAAATATGGGTGAACACAATTCAAAACGAAAACTAGAAGAAGCGGGAATTGAAGAAGACAATGATCAAGAGGAAGAGAACCAAGAAGAAGATGAAAAAGATGTCAAAGAAGATGAAAACAACAAAGAAAATGTGGTTCTGATCAATCATCCACCGACTTCAAAACGCAAGCCAAATTCAAGAAGAAAGGGAATACCCCGTAGGGCACCTTTCTTTTAA 933 0.3623 MEDDEIKAHTPYIDGSLHECLALTTDHMPRPKKPSIKFKELPKNMRSEFLDKELKRPVIVNDMMFVPWLKKLLSITTFFTLCEVHPNVPKNECNMFCLDCNDNPFCGSCITSGHKDHNVIQIRRSSYNDAVRTTDIYKFVDILGIQTYMINNSTIVFINKRDRSHPKRNNVSNFGYMSDSLCKICKRNLVDPTYFCSLECKFAWIEKEGGFFVSAKEKKELEFLLEKSIKVIPPKGKTKNMGEHNSKRKLEEAGIEEDNDQEEENQEEDEKDVKEDENNKENVVLINHPPTSKRKPNSRRKGIPRRAPFF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi127g00016 310 Pfam PLATZ transcription factor 123 201 IPR006734 -
Vivi127g00016 310 MobiDBLite consensus disorder prediction 256 272 - -
Vivi127g00016 310 MobiDBLite consensus disorder prediction 240 255 - -
Vivi127g00016 310 Coils Coil 259 279 - -
Vivi127g00016 310 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 66 309 - -
Vivi127g00016 310 SUPERFAMILY B-box zinc-binding domain 80 123 - -
Vivi127g00016 310 CDD Bbox2 81 122 - -
Vivi127g00016 310 Gene3D Classic Zinc Finger 77 134 - -
Vivi127g00016 310 MobiDBLite consensus disorder prediction 234 310 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi127g00016 PLATZ 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi127g00016 - - vvo:131624940 603.208