LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi127g00008	ATGTCATCTATTTGTAAATTCATAGATGGAGTAAAAGCAGCATTTCTAATGGTGGTGGTTCAAATTGCTTATGCTGTTGTTAGCATATTGTACAAATTGGTTGCAGATAATAATGGGATGAGTTTGTGTGTACTTGTGGCTTATCGTTACCTCTTTGCATCAATTTTTATGGTTCCTCTTGCTTACTTTGCTGAGAGGAAGAGCAAACCAAAGATCACTGCAGAAGTTCTTTTTCAAGCTTTTCTTTGTGGATTATTTGGGGCAACCTTACAACAAAATTTATACGTTGAAGCCGTAGTTTTAGCGGGTGTAACATATGCTACGGTCATGTATAATTTTATTCCAGGTGCAACCTTCACCTTAGCCGTCTGTTTCGGATTAGAAAGGTTAAACATTAGAACATTAACCGGAAAAGCCAAGGTGATTGGCACATTAATGGGAATTAGTGGAGCTATGATTCTCACTTTTTATAAAAGCACTGAAATTCACATATGGTCTACTAATGTGAATTTGTTGAAACATCATCTACAACCACAAAATGTTTCTACTAATAATATATGGGGCTCTTCTCTTGCATTGGGCACTTGTATATCATATTCAATATGGTTGATAATTCAGGCTAAGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCAGCATTGATGTCAGTGATGGCTTCTATCCAATCAATTATATTTGCATTATTCATGGAAAGAGGTGATTGGAATCAATGGAAGCTTGGTTGGGATATCAAACTTTTCACTGCACTTTTTGCGGGTGTTATGGCCTCCGGAATAGTTTGGGTTTTGATTGCATGGTGTGTGCGCATAAAAGGTCCACTCTATGCTTCTGTTTTCAACCCTCTCTTTCTTGTTCTAGTGGCCATTGGAGGATCTCTCTTATTAGATGAAAGACTTCATTTGGGAAGTGTAATAGGATCATTGATCATTGTGATTGGGCTATACATTGTCTTGTGGGGTAAAGGTAGAGAATTGAAGAAAACTATTGAGATTCAACCCTTGGAGATAATAACCACAAAGCTTCAAGATGCTAAAAGTCTTGAGATTGATGATAACATTGTTTTGAAGGAAAACAATTATCTATAA	1110	0.3667	MSSICKFIDGVKAAFLMVVVQIAYAVVSILYKLVADNNGMSLCVLVAYRYLFASIFMVPLAYFAERKSKPKITAEVLFQAFLCGLFGATLQQNLYVEAVVLAGVTYATVMYNFIPGATFTLAVCFGLERLNIRTLTGKAKVIGTLMGISGAMILTFYKSTEIHIWSTNVNLLKHHLQPQNVSTNNIWGSSLALGTCISYSIWLIIQAKMSEKFPWHYTSAALMSVMASIQSIIFALFMERGDWNQWKLGWDIKLFTALFAGVMASGIVWVLIAWCVRIKGPLYASVFNPLFLVLVAIGGSLLLDERLHLGSVIGSLIIVIGLYIVLWGKGRELKKTIEIQPLEIITTKLQDAKSLEIDDNIVLKENNYL	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi127g00008	369	Pfam	EamA-like transporter family	13	154	IPR000620	GO:0016020
	Vivi127g00008	369	Pfam	EamA-like transporter family	187	326	IPR000620	GO:0016020
	Vivi127g00008	369	PANTHER	WAT1-RELATED PROTEIN	14	333	IPR030184	GO:0016020\|GO:0022857
	Vivi127g00008	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	225	331	-	-
	Vivi127g00008	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	48	154	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi127g00008	11	359	Nodulin-like Gene Family	AT1G25270	41.193	1.73e-84	259

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi127g00008	-		-	tpra:123896693	565.459