Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1270g00003 ATGTCAAATCAACTCAACGGCGCTTACTACGGCCCTTCCATCCCTCCGCCGCAACCCCACCGTCGCCACCGCAACGACTCCTCCTGCGGCTTCTGCAGCTGCCTCTGCGGCTGCTTCCGCGGCTGTTGCGGCTGCATCTTCAACTGCATCCTAAGCATCATCTGCAAAATCCTAACCACAATCATCATCATTGCCGTCATCCTCGGCTTCCTCGCCTGGCTCATCGTCCGTCCTAACGTTATCCACTTCACCGCCACCGATGCTTCCCTTTCTCAGTTCAATTTCACCAAAAACAACACTCTCAACTACGATCTCGCCGTCAACATCACCATCCGAAACCCTAACCGAAGAGTCGGAGTCTATTACGATAGCATCGAAACGGTTGCGTTTTATAAAGATGTTGCGTTTGGGAATCAAACGCTAGGGGGATTCTTTCAGCATCATAAGAGTACGAATTTCTTGAATCCTGTTTTCAAAGGTGAACAAGTGATTCTGTTGAGTTCAGATCAGGTTTCGGATTTCGACAAAGAGAAGGAGAGTGGAGTTTATGGAATTGATGTGAAGATTTTGATGAATGTGAGGTTTAAATTGGGGTTGTTTAAGTCGGGGAAAGCGAAACCTAAGGTTCGTTGTGATTTGCAGATTCCTCTGAAATCGGGGAATGGAAGTTCTTTGAGTAATGTGTTTCAGGTTACTGAATGTGATTGGGATTACAAATGGAGATTGTTCCATTAG 735 0.468 MSNQLNGAYYGPSIPPPQPHRRHRNDSSCGFCSCLCGCFRGCCGCIFNCILSIICKILTTIIIIAVILGFLAWLIVRPNVIHFTATDASLSQFNFTKNNTLNYDLAVNITIRNPNRRVGVYYDSIETVAFYKDVAFGNQTLGGFFQHHKSTNFLNPVFKGEQVILLSSDQVSDFDKEKESGVYGIDVKILMNVRFKLGLFKSGKAKPKVRCDLQIPLKSGNGSSLSNVFQVTECDWDYKWRLFH 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi1270g00003 244 Pfam Late embryogenesis abundant protein 108 211 IPR004864 -
Vivi1270g00003 244 PANTHER OS05G0367900 PROTEIN 53 219 IPR044839 GO:0098542
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1270g00003 75 224 SNARE and Associated Proteins AT1G32270 34.667 1.56e-27 106
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1270g00003 - - aprc:113873272 275.789