Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi126g00025 ATGAGATATGCGATGTCTGGTTCGAAATCCAAATATATGATCCTGTGTTTTTTTCTGACTTTGAATTTGTGTCTTCAAGAGTTTGAATCCAACGCTCAACTCATACCACAAGATGAAGTGAAATCTCTACAAACAATATCAGATAAACTAAAGAACGTGAATTGGAAAGTAACACAACGTTCTTGCATTGATGGTAGAGGCTTTGATAATGATAATGTGGATGATGATACCGTCAGGAATGTCACATGTGATTGCACTTTCCAAAATGAAACTGTTTGCCATGTCACTAGCATTTTTCTAAAGGGACAAAATATAGCTGGAATCATGCCTAGTGAATTTGGAGATCTTACTCAATTGAAAATACTTGATCTTACGCGGAACTATCTCAACGGCTCCATTCCGACGAGTTTTGCTAACAAATCTCTAGTCGTTTTGTCGCTTTTGGGAAACCGGTTAAGTGGTCCGATTCCCGCAGAAATTGGAGATATTGCTAGCTTGGAGGATTTGGTTTTAGAAAATAATCAACTTGGAGGACTACTTCCTGCTAGTCTTGGAAATTTGAGCAACTTGAAGAGACTGCTTCTTTCTTCGAATAATTTTACTGGCACGATTCCAGAATCATTTAGCGAACTAAAGAATCTCACTGATTTTCGGATAGATGGAAGCAGTTTATCTGGACAGATACCTAGTTTTATCGGGAACTGGACCAAGCTTGGGAGATTGGATATGCAGGGAACATCTATGCAAGGTCCAATTCCCCCTACCATATCGGGGTTGAAACTTTTGACTGAGTTGAGAATAAGTGATTTGAATGGACCGACTATGACATTTCCTAATCTGAAGGATTTGAAAAACTTGCAACTACTGGAGCTGAGAAATTGCTTAATCACGGGTCCTATTCCCGATTACATTGGTGAAATGACAAACTTAGTTACTTTAGATCTAAGCTTCAATATGTTTACTGGTTCAATCCCAAATTCAGTTCAGGGATTGAAAAGGCTAAATTACATGTTTATGACCAATAATTCTTTGAGTGGACCGATTCAAGACTGGATACTGGACTTCAAAATTAACATAGATTTATCTTACAACAATTTTACAAAGTCTTCTGCAACTAGCTGCCAGCAGCTAAATCTGAACTTGGCTTCGAGCTATTCGTCATCAGCGGTCACTTCACCTTCAACGTTTTGTTTGAAGAGGAACCTTCCTTGTGCAGGAAAACCTCAATATGATTCATTGTTCATAAACTGTGGAGGACCAGAAGAAGATTTTGATGGAAATCACTATGTAGGTGACCTGCAGGAAAATGGAATTTCAAATTTCGTTCTTAGAAATTCAGGACAATGGGCTTATAGCAGCACAGGAGTGTATATGGGAAATGTTCATGCAGACTATACCGCGTCAAATACTTATTCTTTGAATATTAATGGCCCAGACTACTATAAAACCGCTCGGCTTTCCCCTCTGTCACTTAGTTACTATGGCCTTTGTATGCAGAAGGGAAATTATAAAGTGAAGCTCCACTTTGCTGAGATAATGTTTTCTGATGACCAGACCTTTAAAAGTCTCGGAAGACGCATATTTGATGTTTCAATTCAAGGTTTTAAATATCTGAAAGATTTTAACATTATGGAAGAAGCTGGTGGAGTTGGAAAGGGAATAACTAAGGAATTCGATGTTGATGTCAATGACAACACGTTGGAAATTCACTTATATTGGGCAGGGAAAGGAACCACGGCCATTCCTGACAGAGGTGTATATGGACCTCTTATATCAGCTATCACAGTAACACCGAACTTTAAAAATCATTCAAAAGCATTGTCTGCTGGAGTTATTATTGGAGTTGTGGCTGCATCATGTGTGCTTGTCTTACTCGTAGTGGTTGCCCTTTGGAAGATGGGTTTCCTTTGTGGAAAAGATATAAGAGACAAAGACCTTCTTGACCTTAAAACAGGTTATTTCAGCTTGAGACAAATTAAAGCGGCTACTAATGACTTTGACCCTGCAAATAAGATTGGTGAAGGGGGATTTGGGCCAGTATTCAAGGGTGTGCTGCCAGATGGTGATGTCATTGCTGTTAAACAGCTCTCCTCCAAATCAAGGCAAGGGAACCGCGAATTTGTTAACGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGCTGTTGCATTGAAGGAAAGCAGTTACTACTGATATATGAATACATGGAGAACAACTGTCTTGGCCGTGCACTTTTTGGTCATCAGGAACAGAAGCTCCACTTGGATTGGCCTACAAGAATGAAGATATGTCTTGGTATAGCTAAGGGATTAGCTTATCTTCATGAAGAATCAGCACTGAAAATAGTACATAGAGACATTAAAGCAACAAATGTATTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTCGGTTTAGCCAAGCTTGATGACGAAGGGAACACCCATATCAGTACACGGGTAGCTGGAACAATTGGATACATGGCTCCAGAATATGCTATGCGGGGTTACTTGACTGATAAGGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGCGGAAAAAGCAACACAAATTTCAACCCAATGGAGGAGTTTGTATATCTTATGGATTGGGCCTATGATCTCCAAGAGCAAGGACGCCTTATGGAGCTGGTGGATCCAAATCTTGGTTCAAGTTATTCCACAAAGGAGGCCATGAGAATGCTGAACTTGGCATTGTTATGCACTAACACATCTCCCACTCATAGACCACCCATGTCATTGGTAGTAAGCATGCTTGAAGGTAAAACTCCAATCCTAGCGCCCTTAATCAACCGCGGTGAGAGTGGCCGCCATGCAAGACTCAAAGCCTCTGAGTTGCTGGCAGAAGATAGTCAACCTCTTGATTCTTCTACATTTTTACCCGAAAGCATCGATAGAAGACATGGATCATCAAATGGTCCATGGGTTCCCACCTCCATATCTCTTCAAAGTAAAGATGATTTTTCTTCAAGCAGTAAACTTCCTTAG 3042 0.4004 MRYAMSGSKSKYMILCFFLTLNLCLQEFESNAQLIPQDEVKSLQTISDKLKNVNWKVTQRSCIDGRGFDNDNVDDDTVRNVTCDCTFQNETVCHVTSIFLKGQNIAGIMPSEFGDLTQLKILDLTRNYLNGSIPTSFANKSLVVLSLLGNRLSGPIPAEIGDIASLEDLVLENNQLGGLLPASLGNLSNLKRLLLSSNNFTGTIPESFSELKNLTDFRIDGSSLSGQIPSFIGNWTKLGRLDMQGTSMQGPIPPTISGLKLLTELRISDLNGPTMTFPNLKDLKNLQLLELRNCLITGPIPDYIGEMTNLVTLDLSFNMFTGSIPNSVQGLKRLNYMFMTNNSLSGPIQDWILDFKINIDLSYNNFTKSSATSCQQLNLNLASSYSSSAVTSPSTFCLKRNLPCAGKPQYDSLFINCGGPEEDFDGNHYVGDLQENGISNFVLRNSGQWAYSSTGVYMGNVHADYTASNTYSLNINGPDYYKTARLSPLSLSYYGLCMQKGNYKVKLHFAEIMFSDDQTFKSLGRRIFDVSIQGFKYLKDFNIMEEAGGVGKGITKEFDVDVNDNTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKNHSKALSAGVIIGVVAASCVLVLLVVVALWKMGFLCGKDIRDKDLLDLKTGYFSLRQIKAATNDFDPANKIGEGGFGPVFKGVLPDGDVIAVKQLSSKSRQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLIYEYMENNCLGRALFGHQEQKLHLDWPTRMKICLGIAKGLAYLHEESALKIVHRDIKATNVLLDKDLNAKISDFGLAKLDDEGNTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNFNPMEEFVYLMDWAYDLQEQGRLMELVDPNLGSSYSTKEAMRMLNLALLCTNTSPTHRPPMSLVVSMLEGKTPILAPLINRGESGRHARLKASELLAEDSQPLDSSTFLPESIDRRHGSSNGPWVPTSISLQSKDDFSSSSKLP 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi126g00025 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 948 - -
Vivi126g00025 1013 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Vivi126g00025 1013 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Vivi126g00025 1013 Gene3D Phosphorylase Kinase; domain 1 637 741 - -
Vivi126g00025 1013 SUPERFAMILY L domain-like 81 371 - -
Vivi126g00025 1013 MobiDBLite consensus disorder prediction 970 1013 - -
Vivi126g00025 1013 ProSiteProfiles Protein kinase domain profile. 666 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi126g00025 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Vivi126g00025 1013 CDD STKc_IRAK 672 939 - -
Vivi126g00025 1013 Pfam Malectin domain 413 594 IPR021720 -
Vivi126g00025 1013 Gene3D - 412 600 - -
Vivi126g00025 1013 SMART LRR_typ_2 187 211 IPR003591 -
Vivi126g00025 1013 SMART LRR_typ_2 116 139 IPR003591 -
Vivi126g00025 1013 SMART LRR_typ_2 307 330 IPR003591 -
Vivi126g00025 1013 SMART LRR_typ_2 163 186 IPR003591 -
Vivi126g00025 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 410 599 - -
Vivi126g00025 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 203 - -
Vivi126g00025 1013 Gene3D Transferase(Phosphotransferase) domain 1 742 943 - -
Vivi126g00025 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 741 - -
Vivi126g00025 1013 SUPERFAMILY Protein kinase-like (PK-like) 651 942 IPR011009 -
Vivi126g00025 1013 SMART serkin_6 666 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi126g00025 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 272 395 - -
Vivi126g00025 1013 Pfam Protein tyrosine and serine/threonine kinase 670 936 IPR001245 GO:0004672|GO:0006468
Vivi126g00025 1013 Gene3D Ribonuclease Inhibitor 36 272 IPR032675 -
Vivi126g00025 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 952 - -
Vivi126g00025 1013 MobiDBLite consensus disorder prediction 990 1013 - -
Vivi126g00025 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Vivi126g00025 1013 Gene3D Ribonuclease Inhibitor 273 387 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi126g00025 8 1004 Receptor kinase-like Gene Family AT1G53440 61.386 0.0 1214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi126g00025 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi126g00025 - - gmx:100815226 1497.26