Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi126g00024 ATGACTTTCTTTTTCTTATTCCCTCTCTTTTTACTCCTTCCTTTCTTTTTTGATTCGTTTTCTCTCGGAGCCACTCTTCACGAAGATGAAGTGAAAGCTCTGATGGACATAGGCAAAACACTTGGGAAGAAAGATTGGGACTTCAGTGTAGATCCATGTAGTGGACAGAACAACTGGATATCGCCAACTCAATTACAAGGTTCTGAAAATGCTGTTACTTGCAATTGTTCTTTCCAAAATAACACTCTCTGCCACGTTGTTAGCGTTGTTCTAAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGTCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGAACAATTCCTAAAGAATGGGCCACATTAAGTCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCAGGTCCAATTCCAAAGGAGTTTGGAGACATCACCACTCTCAAAAGCTTGGTATTGGAATTCAACCAACTATCAGGAAATCTTCCTCCAGAACTTGGGAGTCTTAACAAGATTGAAAGACTGCTTCTTTCCTCCAACAATTTCACTGGAGTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCGAATTGGCGACAGTCAATTCTCTGGAGCTATACCCAATTTTATACAGAGTTGGAAAAATCTTGAGATGCTTGTGATCCGAGGGAGCGGTTTGAATGGACCAATTCCTTCTGGAATTTCACTTTTGAAAAACCTAACTGACTTGACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGAAAATATGTCAAAGCTGTCAAAATTAGTATTGAGAAGTTGCAATATCATTGGAGCAGTGCCTGGATATCTTGGAAAGTTAACTAAACTGAAAGCGATAGACCTCAGCAACAACAAATTAAGTGGACAAATCTCCACGGGCTTAGGGGGTCTACAGAACATCATGTACTTGCTATTTTTATCTGGGAATCAGCTGTCTGGACCGCTGCCTGACTGGATAGTTAAACCAGACTTTGTAGATCTGTCGTATAACAACTTCACTATATCAAACTTTGAGCAGCAGACTTGTCAACAAGGAAGTGTAAACTTGTTTGCGTCTTCTTTGACGGGAAACAGCTTAGGAAATGTTTCATGTTTGGAAAACTATCAATGTCCTAAAACTTGGTACTCTCTCTACATAAACTGCGGTGGGAAGCGCAAAACAGTTGATGGAAATAAGACATATGATGATGATTCAGCTGAGATGGAATCAGCAAGATATCGTCAAATCGGAACAAATTGGGCACTTATAACTGCTGGTCACTTTTTTGATAGTGGACGCTCTGACTACTACATATGGTCTAATGCAACAAAGCTTGCCATCGACAATGGTACTGAACTGTACATGGATGCACGTGTTTCCCCAAATTCTCTTACTTATTATGCATTCTGCATTGGAAATGGAAACTACACTGTGAATCTCCATTTTGCTGAAATAATGTTCAGTGATGATGAAACATTTAGCAGCATCGGAAGACGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGGTGAAGGATTTCGATATTGCAAAAGAGGCAGGTGGTGTTGGCAAGGCAGTCATTAAAAGTTTTACTGCTGGTGTGACTAGAAACGCATTGGAGATTCGGTTAAGTTGGGCTGGGAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGGCCTCTTATATCAGCTATATCAGTTGATCCGGATTTTACACCTCCATCGGAAAATAATAGAAGCCTACCTGTAGGAGCTGTAGTTGCCATTGTGGTTGCTGGAGTAATTGTTATCATCTTTGTAATTGGCATAATGTGGTGGAAGGGTTGTTTAACACATAAATGTTTAGGAGCAAGAGAGCAAAAGGGTTTTGCTTCACAAACTGGCTTATTCAGCTTACAGAAAATCAAAGCAGCAACAAACAACTTTGATGAATCCTTTAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGTGTTTTACAAGATGGCACAATAGTAGCAATTAAGCAGCTATCTTCTAAATCAACTCAAGGATCTCGTGAATTTATTAACGAGATAGGCATGATTTCGACTTTACAACACCCTAATCTTGTTAAGCTCTATGGCTTCTGTATGGAAGATGATCAGTTATTGTTGATTTATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGAATGGAAAACTAGGAAGAGAATTTGTATTGGTATAGCTAAAGGTTTGGCTTACCTGCATGGAGAGTCAAAAATAAAGATCATTCATAGAGACATCAAGGCCACTAATGTGTTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAGCTCAATGAAGACGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTAACGGACAAAGCAGATGTTTATAGTTTTGGAATTGCTGTGTTGGAAATTGTTAGTGGAACCAACAACACCGTTAGTCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAAAAGATAATCTATTGGAGTTCGTTGATCGGAGATTGGGCGAAGACTTCAAGAAAGAGGAGGTTACAACGATGATCAATGTGGCTCTTTTATGCACTAGTTTTTCTCCCTCGCTCAGGCCCTCCATGTCTTCAGTAGTAAGCATGCTTGAAGGAAGAACAAATGTTCAAGAAGTAGTGGCAGAATCAATTGAGGTACTGGATGATAAGAAATATAAGGTGATGCAACAATACTACAAACAAACAGGAGAAAGTAGCACAAGTGAACCTCAAAGCCGAAGCCGAAGCATCGCAACAGATGAATCTAATGCCTTTATTTATGATACAGATTCTTCATGCTGGGAACCAAGAAATTAG 3018 0.3956 MTFFFLFPLFLLLPFFFDSFSLGATLHEDEVKALMDIGKTLGKKDWDFSVDPCSGQNNWISPTQLQGSENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLSFLQEIDLTLNYLNGTIPKEWATLSLVNISFYGNRLSGPIPKEFGDITTLKSLVLEFNQLSGNLPPELGSLNKIERLLLSSNNFTGVLPATFAKLTALKQFRIGDSQFSGAIPNFIQSWKNLEMLVIRGSGLNGPIPSGISLLKNLTDLTITDLNGSDSPFPQLENMSKLSKLVLRSCNIIGAVPGYLGKLTKLKAIDLSNNKLSGQISTGLGGLQNIMYLLFLSGNQLSGPLPDWIVKPDFVDLSYNNFTISNFEQQTCQQGSVNLFASSLTGNSLGNVSCLENYQCPKTWYSLYINCGGKRKTVDGNKTYDDDSAEMESARYRQIGTNWALITAGHFFDSGRSDYYIWSNATKLAIDNGTELYMDARVSPNSLTYYAFCIGNGNYTVNLHFAEIMFSDDETFSSIGRRVFDIYIQRKLVVKDFDIAKEAGGVGKAVIKSFTAGVTRNALEIRLSWAGKGTTTIPFGSVYGPLISAISVDPDFTPPSENNRSLPVGAVVAIVVAGVIVIIFVIGIMWWKGCLTHKCLGAREQKGFASQTGLFSLQKIKAATNNFDESFKIGEGGFGPVYKGVLQDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLEWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIAVLEIVSGTNNTVSHPQEECFSLLDWVHLLKEKDNLLEFVDRRLGEDFKKEEVTTMINVALLCTSFSPSLRPSMSSVVSMLEGRTNVQEVVAESIEVLDDKKYKVMQQYYKQTGESSTSEPQSRSRSIATDESNAFIYDTDSSCWEPRN 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi126g00024 1005 SUPERFAMILY Protein kinase-like (PK-like) 644 938 IPR011009 -
Vivi126g00024 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
Vivi126g00024 1005 CDD STKc_IRAK 668 939 - -
Vivi126g00024 1005 Gene3D - 399 589 - -
Vivi126g00024 1005 MobiDBLite consensus disorder prediction 967 990 - -
Vivi126g00024 1005 SMART serkin_6 662 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi126g00024 1005 Gene3D Phosphorylase Kinase; domain 1 631 737 - -
Vivi126g00024 1005 Gene3D Ribonuclease Inhibitor 196 266 IPR032675 -
Vivi126g00024 1005 Gene3D Ribonuclease Inhibitor 29 195 IPR032675 -
Vivi126g00024 1005 Pfam Malectin domain 401 585 IPR021720 -
Vivi126g00024 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 399 590 - -
Vivi126g00024 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Vivi126g00024 1005 Gene3D Ribonuclease Inhibitor 267 397 IPR032675 -
Vivi126g00024 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 195 262 - -
Vivi126g00024 1005 SUPERFAMILY L domain-like 80 358 - -
Vivi126g00024 1005 Pfam Protein tyrosine and serine/threonine kinase 667 937 IPR001245 GO:0004672|GO:0006468
Vivi126g00024 1005 ProSiteProfiles Protein kinase domain profile. 662 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi126g00024 1005 Gene3D Transferase(Phosphotransferase) domain 1 738 962 - -
Vivi126g00024 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 949 - -
Vivi126g00024 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 30 189 - -
Vivi126g00024 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 972 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi126g00024 20 975 Receptor kinase-like Gene Family AT1G53420 53.044 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi126g00024 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi126g00024 - - gmx:100786496 1323.15