Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi126g00008 ATGCCAGGGACTAATAAATACAACGGTGATTCAAATCATATACCGGGACGTGTAGAAAGACGGTTGAGAGACAGAGAGTTGAGAAAAAGAGGAAGTGAAAACAATGAGTATTTGGAGCAGGATCATCAAGATAAAGATGATGTTGAGAAAGTATCATCTTCGTCAATAAGGGAGAGAAGATTACACGAAGGAGAAGATGTTGTTGGAAAGTATGATAGTAATAATAATAGACAGAGGCTTTTGGTTGTGGCTAACAGATTGCCCGTGTCGGCTATTAGAAAAGGTGAAGATAGTTGGTCTTTGGAGATTAGTGCAGGTGGCCTTGTTAGCGCTCTCCTAGGGGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTTCCGGATGAGGTTGGACAGAAGGCACTCACTAAAGCATTAGCTGAAAAGAGGTGTATACCTGTATTTCTGGATGAAGAGATTGTTCATCAATATTACAATGGCTACTGCAACAACATTCTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCCACCACACGAAGTTTCCAATCTCAATTTGCGGCCTATGAGAAAGCAAATCAGATGTTTGCCGATGTTGTCAACCAACATTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTGAAGAAATATAACAGTAAAATGAAAGTCGGGTGGTTTCTTCACACACCTTTTCCTTCTTCTGAAATTCACAGGACACTGCCTTCTCGTTCCGAGCTTTTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCGTGTACTCGCATCCTTGGACTTGAAGGTACACCTTACGGGGTTGAGCATCAAGGGAAGCTAACTGGAGTTGCCGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCGCTAGACCTTCCTCAAGTGCAGGAACATATCAAAGAATTGCAAGAAAGATTCAAAGGAAGAAAGGTCATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTCATTGGCGCGATAAAGTAGTTTTGCTTCAAATCGCCGTCCCAACAAGAACAGACGTTCCAGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGCCGCATCAATGGTAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTGTGTACGCAGTTACTGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTGAGTTATGAATTTGTGGCCTGCCAAGAGAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCCCAGTCTCTTGGTGCCGGGGCAATTCTTGTCAACCCCTGGAATGTTACAGAAGTTGCTGCTGCAATTGCAAGGGCTCTGAATATGCACCCCTCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTTAAATCCCACACTGCACAAGAATGGGCAGCAACATTTGTCAGCGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACTAGACAAGTTCCGCCTAAGCTTCCAACAGAGATTGCAATTAGACGTTATCGACACTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACAGAACCGGTTGAGAAAACTGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAACTGAGAGAACCCTTAACTGCACTTTGCAATGATCCAAATACCACAGTAGTTGTGCTCAGTGGAAGTGGTAGAAAAGTTCTATATGATTGTTTCAAAGAATACGACCTGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACACTGCCGGAGCACCTGAATATGGAATGGGTCGACAGCGTGAAACATGTTTTTGAGTACTTCACAGAAAGAACACCGCGGTCACACTTTGATTTGGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATACGCAGATGTCGAGTTTGGAAAACTTCAAGCAAGAGATATGCTGCAACATCTCTGGTCAGGTCCGATTTCTAATTCGTCAGTTGAAATTGTTCAAGGCAGCCGGTCGGTTGAGGTTAGAGCTGTTGGCGTTACAAAGGGAGCAGCTATTGACCGCATCCTCGGAGAGATAGTTCACAGTAAATCAATGACGTCGCCAATTGATTATGTTCTTTGTATAGGACATTTTCTCGGAAAGGATGAAGATCTTTATTCCTTTTTTGAGCCGGAGCTTCCATCTATCGGTGCTGGTCTTCCGCGAAGCAATAAGGTACCAACAGAAGCAGTTAAGTCTCCTGTTGAGAAGAAACCACCTTTGAAAATTCCCGCTAGTAGTAAAAATGGAGCAAAGTCATCATCATCATCATCATCTCAAAACAAGGGAGTCTCAAATTCTGATCAGAAGAAAACAAATAATCAAATTTGCAGTTCACCACGACGCCCGGCTCCAGAAAATACATCACGGAATGTCCTTGACCTTAAGAAGGAGAATTACTTCTCATGTTCTGTAGGGCGGAACCGAACCAATGCTCGGTATACACTTGCCTCACCGGATCATGTTGTTGAGTTTCTGACGGAGCTAGCGGATGGACTACCGCGCTCTAGTTAA 2766 0.4248 MPGTNKYNGDSNHIPGRVERRLRDRELRKRGSENNEYLEQDHQDKDDVEKVSSSSIRERRLHEGEDVVGKYDSNNNRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEHQGKLTGVAAFPIGIDSERFIRALDLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCAVYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIARALNMHPSEREKRHKHNFLHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPKLPTEIAIRRYRHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELREPLTALCNDPNTTVVVLSGSGRKVLYDCFKEYDLWLAAENGMFLQPSKGEWMTTLPEHLNMEWVDSVKHVFEYFTERTPRSHFDLEERETSLVWNYKYADVEFGKLQARDMLQHLWSGPISNSSVEIVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYSFFEPELPSIGAGLPRSNKVPTEAVKSPVEKKPPLKIPASSKNGAKSSSSSSSQNKGVSNSDQKKTNNQICSSPRRPAPENTSRNVLDLKKENYFSCSVGRNRTNARYTLASPDHVVEFLTELADGLPRSS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi126g00008 921 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 666 748 - -
Vivi126g00008 921 Gene3D - 666 748 - -
Vivi126g00008 921 Gene3D Glycogen Phosphorylase B; 326 529 - -
Vivi126g00008 921 CDD GT20_TPS 79 544 IPR001830 GO:0003824|GO:0005992
Vivi126g00008 921 SUPERFAMILY HAD-like 576 764 IPR036412 -
Vivi126g00008 921 Gene3D Glycogen Phosphorylase B; 70 325 - -
Vivi126g00008 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 326 528 - -
Vivi126g00008 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 71 325 - -
Vivi126g00008 921 Pfam Glycosyltransferase family 20 79 544 IPR001830 GO:0003824|GO:0005992
Vivi126g00008 921 MobiDBLite consensus disorder prediction 831 870 - -
Vivi126g00008 921 MobiDBLite consensus disorder prediction 13 56 - -
Vivi126g00008 921 MobiDBLite consensus disorder prediction 1 56 - -
Vivi126g00008 921 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 72 914 IPR001830 GO:0003824|GO:0005992
Vivi126g00008 921 Pfam Trehalose-phosphatase 582 801 IPR003337 GO:0003824|GO:0005992
Vivi126g00008 921 CDD HAD_TPP 577 796 - -
Vivi126g00008 921 Gene3D - 579 762 IPR023214 -
Vivi126g00008 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 546 - -
Vivi126g00008 921 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 79 544 IPR012766 GO:0003825|GO:0005992
Vivi126g00008 921 MobiDBLite consensus disorder prediction 803 875 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi126g00008 1 915 Trehalose Biosynthesis Gene Families AT1G78580 75.713 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi126g00008 K16055 - gmx:100797320 1528.07