Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi125g00015 ATGGCGGTTACACTCTATAACCTTAAGTCTGAATCTGGTTTGAAGAAGCTCAATGAGTACCTTCTCACACGCAGTTATATCACTGGATACCAAGCTTCGAAGGATGATATCGCTGTTTATTCAGCTTTGCCATCAGTTCCATCCTCTGAATATGAGAATGTTGCTAGGTGGTTCAAGCACATTGATGCATTATTGAGAATTTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTGAATCATCGCTAGTTGCTGAAGAGGCTGTTGCCACTCCTCCAGCTGCTGACACAAAGGCTACTGAAGCTGAGGACGACGATGATGACGATGTGGATTTGTTTGGTGAAGAGACTGAGGAAGAAAAGAAGGCAGCTGAGGAACGGGCAGCAGCCGTGAAAGCATCCGGCAAAAAGAAAGAGAGTGGGAAATCATCTGTATTGTTGGATGTGAAGCCATGGGACGATGAAACCGACATGAAGAAGCTTGAAGAAGCAGTGAGATCTGTTCAGTTGGATGGATTGTTATGGGGTGCATCCAAACTTGTTCCGGTTGGATATGGTATCAAGAAACTTCAAATTATGATGACAATTGTGGATGACTTGGTTTCTGTTGACAATATGGTTGAGGATTACCTTACCGTTGAGCCCATCAACGAGTATGTCCAGAGTTGTGACATTGTGGCCTTCAACAAAATATAA 696 0.4397 MAVTLYNLKSESGLKKLNEYLLTRSYITGYQASKDDIAVYSALPSVPSSEYENVARWFKHIDALLRISGVSGEGSGVTVESSLVAEEAVATPPAADTKATEAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQLDGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDNMVEDYLTVEPINEYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi125g00015 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vivi125g00015 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Vivi125g00015 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Vivi125g00015 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vivi125g00015 231 Gene3D - 135 231 IPR014717 -
Vivi125g00015 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Vivi125g00015 231 FunFam Elongation factor 1-delta 1 3 78 - -
Vivi125g00015 231 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Vivi125g00015 231 MobiDBLite consensus disorder prediction 85 110 - -
Vivi125g00015 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Vivi125g00015 231 FunFam Elongation factor 1-beta 1 like 136 231 - -
Vivi125g00015 231 Coils Coil 114 134 - -
Vivi125g00015 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Vivi125g00015 231 Gene3D - 2 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi125g00015 7 231 Eukaryotic Initiation Factors Gene Family AT2G18110 81.858 4.07e-115 327