Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1255g00005 ATGATTACCAAAATATTAACAAAGAATCTAACACTCCAAATTCTTCTTCTCACCACTCTTACCTTAACCATAACAAAAACCTCTGCATCTGTCTTCAACAACGTTACCTGCACAAACACCAAAACATTCACACCAAACAACACTTTCCATTCCAATCTCAAAACCCTTCTCTCTTCCCTCTCTTCCAACGTAATCAACGATGTTAGATTCTTCAACACAACATCAGGAAACGGTTCGAACAAAGTCTATGGTCTCTACATGTGTCGTGGAGATGTTCCATTCGCTTTATGCAGAGAGTGTGTTGGTTTTGCGACGCTTAAGATTCCATCATCGTGTCCCTCTTCAAAAGAAGCTGTTATCTGGTACAACGAGTGTTTGTTAAGATATTCATATAGATTCATCTTCTCCAAAATGGAAACATGGCCTAGATACAAGATCGAGATTCCAATGGGGGACCCTGGTTTGTTACATAGCAGAAGCTTTTATGCTGGTTTGAGATCTGTATTGAGTGAACTTCCGAAACAAGCTGCGGTTTCTCTTTCTGGTTTTAACAAATATGCTGTTAAGCAAGAAAATGCTTCTGGTAGTGTGACGCTTTATGGTCTTGCTCAGTGTACGCCAGACTTGTCGGCCGGTGATTGTAGGCGGTGTGTCGGTGATGCAGTGGATGAGTTTCCTAAGACTTGTTGTGGTGGTAGCATAGGTGAAACTGTTTTGTTTCCGAGTTGTTTTGTTAGGTATGAGACATATCCGTTTTATCAGCATTCGGGAACTTCTGCATCGATATCAACTTCAGTTAATGGAGGAAGAAATATTCCAACACATGTGATTGCCATCATTGCTATTTTGGTTGTCATTTTGGTGGCGATTTCTTGCATTGGCTGCTGTTTGTTATGGATCAAATCGAAGAAAAGACGCAAAGCCAGCAAACCCAGTGACAGAGAAAATCTTGTGCTCGAATTTAATAACTCGGAGTCACTGGAATTCAATTTTGCTACAATTGAAATAGCAACAGATATGTTTTCTGATGATAGCAGAATAGGCAGAGGTGGATATGGACAAGTTTACAAGGGAATTCTTTCTAGTGGACAAGAAATAGCTGTGAAGAGGTTGTCCAAAACATCAGGTCAAGGAGCAGAAGAATTCAAAAATGAAGTCATGTTAATAGCCAAACTTCAACACAGAAATTTGGTGAGATTAATCGGATTTTGCCTTGAAGAACAAGAAAAGATACTTATCTATGAATATGTGCCTAACAAAAGTCTTGATCACTTCCTATTTGATTCCAAGAAGCAAAAACCATTAACTTGGCCCGAACGGTTTAGTATCATAAAAGGGATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCAAGATTATACATCGTGATATCAAACCAAGCAATGTTCTTCTAGATAACAATATGATTCCGAAAATATCTGATTTTGGCATGGCAAGGATGGTAGATATAGAGCAAATTCAAGGACATACAAATAGAGTTGTGGGCACATACGGTTACATGTCTCCGGAATATGCAATGCACGGACAATTTTCAGTGAAGTCTGATGTTTTCAGTTTTGGAGTTATGGTTCTCGAGATTATCAGCGGAAAAAAGAATTCTTGTTCATTTGAATCGTGTCGTATTGACGATCTCTTGAGTTATGCTTGGAACCAATGGAAAGGTGAATCACCATTTGAGATGTTGGATCCAATTATGCAAGAATCTTATGCTCCAAATGAAGTAGAAAAGTGTGTGCAAATTGGTTTATTATGTGTCCAAGAAAATCCAGATGATAGGCCTACAATGGGAACAATTGTTTCATATCTTAATAATGTCTCAATTGAAATGCCATTTCCTATGGAACCAGCATTTTTCATGCATGGCAGAACAAGAAGAAATTCAGCTGATCAATCATATTCAGGTCACTCCACCAATCATTCTTTCTCTTCAAGTGTATGTCCTCGATAG 1977 0.3859 MITKILTKNLTLQILLLTTLTLTITKTSASVFNNVTCTNTKTFTPNNTFHSNLKTLLSSLSSNVINDVRFFNTTSGNGSNKVYGLYMCRGDVPFALCRECVGFATLKIPSSCPSSKEAVIWYNECLLRYSYRFIFSKMETWPRYKIEIPMGDPGLLHSRSFYAGLRSVLSELPKQAAVSLSGFNKYAVKQENASGSVTLYGLAQCTPDLSAGDCRRCVGDAVDEFPKTCCGGSIGETVLFPSCFVRYETYPFYQHSGTSASISTSVNGGRNIPTHVIAIIAILVVILVAISCIGCCLLWIKSKKRRKASKPSDRENLVLEFNNSESLEFNFATIEIATDMFSDDSRIGRGGYGQVYKGILSSGQEIAVKRLSKTSGQGAEEFKNEVMLIAKLQHRNLVRLIGFCLEEQEKILIYEYVPNKSLDHFLFDSKKQKPLTWPERFSIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNNMIPKISDFGMARMVDIEQIQGHTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSCSFESCRIDDLLSYAWNQWKGESPFEMLDPIMQESYAPNEVEKCVQIGLLCVQENPDDRPTMGTIVSYLNNVSIEMPFPMEPAFFMHGRTRRNSADQSYSGHSTNHSFSSSVCPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1255g00005 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 134 - -
Vivi1255g00005 658 ProSiteProfiles Gnk2-homologous domain profile. 143 252 IPR002902 -
Vivi1255g00005 658 FunFam cysteine-rich receptor-like protein kinase 10 417 619 - -
Vivi1255g00005 658 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Vivi1255g00005 658 ProSiteProfiles Protein kinase domain profile. 341 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1255g00005 658 SUPERFAMILY Protein kinase-like (PK-like) 327 641 IPR011009 -
Vivi1255g00005 658 MobiDBLite consensus disorder prediction 638 658 - -
Vivi1255g00005 658 Gene3D - 156 252 IPR038408 -
Vivi1255g00005 658 Gene3D - 30 133 IPR038408 -
Vivi1255g00005 658 Gene3D Transferase(Phosphotransferase) domain 1 417 620 - -
Vivi1255g00005 658 Pfam Protein tyrosine and serine/threonine kinase 345 612 IPR001245 GO:0004672|GO:0006468
Vivi1255g00005 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Vivi1255g00005 658 FunFam Cysteine-rich receptor-like protein kinase 10 301 416 - -
Vivi1255g00005 658 Pfam Salt stress response/antifungal 159 250 IPR002902 -
Vivi1255g00005 658 Pfam Salt stress response/antifungal 37 130 IPR002902 -
Vivi1255g00005 658 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Vivi1255g00005 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 649 - -
Vivi1255g00005 658 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1255g00005 658 CDD STKc_IRAK 347 614 - -
Vivi1255g00005 658 Gene3D Phosphorylase Kinase; domain 1 301 416 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1255g00005 25 657 Receptor kinase-like Gene Family AT4G05200 44.838 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1255g00005 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1255g00005 - - mtr:25485264 1065.06