Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1253g00006 ATGATGAAACTCCACATCATATGGTTCTTTTCCCTTCAAATTTTGTTGCATGTTTCATCCTCAAGCAGTGGAAAAGTCCCGGCTATAATAGTTTTTGGAGACTCATCTGTTGATTCTGGTAACAACAATTTCATTCCAACAATAGCAAGAAGCAATTTTGAGCCATATGGTAGAGATTTTCCGAATGGAAATCCAACCGGTAGATTCTCAAATGGAAGACTTGCTCCTGATTTCATCTCTGAGGCGTTTGGAATTAAGCCTATTGTTCCGGCTTATTTGGATCCTTCTTATGATATTTCGGATTTTGCGTCCGGCGTTTGTTTTGCTTCTGCTGGTACTGGATTTGATAACGTTACTGCAAGTGTTGCTGATGTGATACCTTTATGGAAAGAAGTTGAGTACTACAAAGAGTATCAAACCAAATTAAGAGCAAAATTTGGTAACAACAAAGCTAATGAAATAATAAGCGAGTCTTTGTATTTGATTAGCATAGGAACAAATGATTTTCTTGAGAATTATTACCAACGTCTTGAAAGGAGGATGCAATTTAGTGTCCAAGAATATGAGGATTTTTTAATTGGACTTGCTGAAAATTTTCTTAAGGAAATTTATTACCTTGGAGCAAGGAAAATTTCTATGACAGGGTTAATTCCTATGGGGTGTCTGCCACTAGAGAGAGCCATAAATATTTTGGGCCATCATGGTTGTAAGGATTTGTACAATGATGTTGCTTTGGAATTTAATGCAAAATTGGAACTGTTAGTGGAAAAGTTGAACATGGAGCTCAATGGATTTCAATTAGTATTAACAAATGCGTATGATTTGGTCATGCAAATTGTTACAGAACCTTCTCAATTTGGTTTTGAAGATGCAACGGTGGGATGCTGTGGAACAGGTAGATTTGAGATGGGTTTCATGTGTGATCCAAAAAGTCCATTTACATGCAAAGATGCAAATAAATATGTATTTTGGGATGCTTTTCACCCTTCAGAAAGAACAAGTCAGATAGTATCAAAATATTTGATGGAAAAATATCTTGGCAAGTTTCTTTGA 1053 0.359 MMKLHIIWFFSLQILLHVSSSSSGKVPAIIVFGDSSVDSGNNNFIPTIARSNFEPYGRDFPNGNPTGRFSNGRLAPDFISEAFGIKPIVPAYLDPSYDISDFASGVCFASAGTGFDNVTASVADVIPLWKEVEYYKEYQTKLRAKFGNNKANEIISESLYLISIGTNDFLENYYQRLERRMQFSVQEYEDFLIGLAENFLKEIYYLGARKISMTGLIPMGCLPLERAINILGHHGCKDLYNDVALEFNAKLELLVEKLNMELNGFQLVLTNAYDLVMQIVTEPSQFGFEDATVGCCGTGRFEMGFMCDPKSPFTCKDANKYVFWDAFHPSERTSQIVSKYLMEKYLGKFL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1253g00006 350 Pfam GDSL-like Lipase/Acylhydrolase 29 341 IPR001087 GO:0016788
Vivi1253g00006 350 SUPERFAMILY SGNH hydrolase 29 345 - -
Vivi1253g00006 350 PANTHER GDSL ESTERASE/LIPASE EXL3 13 341 - -
Vivi1253g00006 350 CDD SGNH_plant_lipase_like 27 345 IPR035669 -
Vivi1253g00006 350 Gene3D SGNH hydrolase 16 345 IPR036514 -
Vivi1253g00006 350 Coils Coil 167 187 - -
Vivi1253g00006 350 FunFam GDSL esterase/lipase APG 18 346 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1253g00006 19 343 Pollen Coat Proteome AT1G75910 35.758 2.47e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1253g00006 - - gmx:100778745 537.339