Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1252g00003 ATGTCACACTTAGATATGAGTTCCGTCCAAGTTCTTTCCAACACCATAATTCATGCACCAAATCACAATACCAATTGCTCAAATGATCATACAATCGATCTAAACCCATTGGATCTACAATTCATCTCATTTGGATATAACCAACAGGGTTTTCTTTATCGCCATCCAATCAACTTAGACATATCAAATCAAATCCAACACCTTAAAGACTCCTTTTCCTCTACTCTTGATGTTTTTTACATCCTTGCGGGTCGTCTCAAAATCACACAACATGAAGATAACACTTTCTCTTGTGCTATCAACTGCAATAACGAAGGTGCACTCTTTGTTCACGCTGCAGCAAAAGATATTAGTGTGGATGATATTCTTAAACCCACTCATCTTCCTCCTATTCATCACTCGCTTTTTTTAATGAATGGAGTCAAAAACTATGAAGGGACATCAAATCCATTACTTGCGGTCCAAGTTACGGAGCTAGATGATGGCATATTCCTTGGGATCTCAACCAACCATGTGACTGGTGATGGTAATTTGTTTTCCAATTTTTACAATTTGTGGGCAAAAATCTCAAGAGGATGTTGTCTTGAAGTATCCAAAACTCCAATATTTGAACGTTGGTTTCCTAAAAGTGTTGAATGTCCGATTCGTTTTCCTCTCACAATAGAGCCACAAAGTAATCTTAAAGGAAAAAAACTCAATCCACCTGAAAGAATATTTCATTTCACAAAAGAGAATATTGCAAAACTAAAACTCAGAGCCAACTTAGAGGCTGGTACAAAGAAAATATCTTCTTTGCAAGCAGTTTTAACTCATATTTGGCGTTCTTTTACACGTTCCCAGAAACTTGACAACCAAACAGATGTGAGTTTTTCAGTTGATGTAAGTGTTAGACCAAGACTGAATCCTCCTTTGCAAGAGAATTATTTTGGTAATGCTATAATAGAATTTTTGGCTACATTGAAAGCGGGTGAATTATTGGATGATGGTGGGCTTGGTAAGGGTGCGTTGAAGATTAATGAGATGATTGCTTTGCACACTGATGAGAAGATAAGAAGTCATTATGAAAAATGGTTAATAAAACCGAGTTTTTATGTTACACCTAATGATATGTCCCATAATAATTGTTTGGTGATTGCTTATTCACCTAGGTTTGATGTATATGGTAATGATTTTGGTTGGGGGAAACCTGTGGGGGTTCGAAGTGGTGGTGCAGATAAACGAGAAGGAAAAGTTAATGTGTTTGCAGGTTTAGAAGAAGGTAGTATGGAGATTGAAGTGTGTCTTCCTTATGAAACTTTAGAAGCAATGGGAAATGATCTCGAGTTTATGGATGTTGTGTCCAACTAA 1347 0.3682 MSHLDMSSVQVLSNTIIHAPNHNTNCSNDHTIDLNPLDLQFISFGYNQQGFLYRHPINLDISNQIQHLKDSFSSTLDVFYILAGRLKITQHEDNTFSCAINCNNEGALFVHAAAKDISVDDILKPTHLPPIHHSLFLMNGVKNYEGTSNPLLAVQVTELDDGIFLGISTNHVTGDGNLFSNFYNLWAKISRGCCLEVSKTPIFERWFPKSVECPIRFPLTIEPQSNLKGKKLNPPERIFHFTKENIAKLKLRANLEAGTKKISSLQAVLTHIWRSFTRSQKLDNQTDVSFSVDVSVRPRLNPPLQENYFGNAIIEFLATLKAGELLDDGGLGKGALKINEMIALHTDEKIRSHYEKWLIKPSFYVTPNDMSHNNCLVIAYSPRFDVYGNDFGWGKPVGVRSGGADKREGKVNVFAGLEEGSMEIEVCLPYETLEAMGNDLEFMDVVSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1252g00003 448 Pfam Transferase family 9 443 - -
Vivi1252g00003 448 Gene3D - 223 438 IPR023213 -
Vivi1252g00003 448 Gene3D - 4 215 IPR023213 -
Vivi1252g00003 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 21 443 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1252g00003 66 434 Monolignol Biosynthesis Gene Families AT5G48930 27.577 6.83e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1252g00003 - - psat:127075665 707.597