Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1252g00001 ATGAGTTCTGTCCAAGTTCTTTCCACCACAATAATTCAAGCACCAAATCACAACCTCAATGGCTCAAATCATCATACAATCGATCTAAACCCATGGGATCTACAACTCCTCCCATTTGGATATAACCAAATGAGCTTTGTCTATCGTCAATCAATCAAATCAGATATATTAAACCAAATCCAACACCTTAAACACTCTTTTTCATCTGCACTTGATTTTTTCCACGTTTTTGCTGGTCGTCTTAAAATCACACAACATGAAGATAACACCATCTCTTGTTCTATCAAGTGCAATAACGAAGGTGCACTCTTTGTTCATGCTGCAGCAAAATATATTATTGTGGAAAATATTCTTGAGCCAACTCATCTTTCTCCTGTTCATCACTCACTTTTTGTAATGAACGGAGTCAAAAACTATCAAGGAACATCACATCCATTACTTGCAGTTCAAGTAACAGAGTTAGATGATGGCATATTTATTGGAATCACAACCAACCATGTGGTTGGTGATGGTACTTTGTTTTCCAATTTTTATAATTTATGGGCAAAAATCTCAAGAGGTTCTGTTGAAATATCCAAAACTCCAATATTTAAACGATGGTTTCCTAAAGGTATTGAATGTCCTATTCGACTTCCTCTCAAAATAGATTCACAAAATAATCTTAATGAAAAAAAACTCAACCCACCAGAGAGAATATTTCATTTCACAAAAGAGAATATTGCAAAACTAAAATCCAAAGCTAATTTAGAGGCTGGTACAAAGAAAATATCTTCTTTGCAAGCACTTTTAACTCACATTTGGCGATCTTTTACACGTTCCCAAAAACTTGACGATCAAACAGATGTGAGTTTTTCAGTTGATATAAGCGTTAGATCAAGACTGAATCCTCCTTTGCATGAGAATTATTTTGGTAATGCTATAATAGAATGTTTGGTTAAAATGAAAGCTGGTGAATTGTTGGATGATGGTGGACTTGGTAAGGGTGCATTGAAGATGAATAAGATGATTTCTTTGCACACTGATGAAAAGATAAGAAGTCACTATGAAAAGTGGTTAATAGAACCGAGTTTTTATGTTACACCTGATGATGTGTCCCATAATAATGGTTTGGTGATTGCTTATTCACCTAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGGAGTTCGAAGTGGTGGTGCAGATAAACGAGAAGGAAAGGTTAATGTGTTTGGAGGTGTAGAAGAAGGTAGTATGGAACTTGAAGTGTGTCTTCCTAATGAAATCTTAGAAGCAATGTCACATGATCTTGAGTTTATGAATGTTGTGTCTTGA 1326 0.3529 MSSVQVLSTTIIQAPNHNLNGSNHHTIDLNPWDLQLLPFGYNQMSFVYRQSIKSDILNQIQHLKHSFSSALDFFHVFAGRLKITQHEDNTISCSIKCNNEGALFVHAAAKYIIVENILEPTHLSPVHHSLFVMNGVKNYQGTSHPLLAVQVTELDDGIFIGITTNHVVGDGTLFSNFYNLWAKISRGSVEISKTPIFKRWFPKGIECPIRLPLKIDSQNNLNEKKLNPPERIFHFTKENIAKLKSKANLEAGTKKISSLQALLTHIWRSFTRSQKLDDQTDVSFSVDISVRSRLNPPLHENYFGNAIIECLVKMKAGELLDDGGLGKGALKMNKMISLHTDEKIRSHYEKWLIEPSFYVTPDDVSHNNGLVIAYSPRFDVYGNDFGWGKPVGVRSGGADKREGKVNVFGGVEEGSMELEVCLPNEILEAMSHDLEFMNVVS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1252g00001 441 Gene3D - 2 208 IPR023213 -
Vivi1252g00001 441 Gene3D - 215 432 IPR023213 -
Vivi1252g00001 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 438 - -
Vivi1252g00001 441 Pfam Transferase family 4 437 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1252g00001 13 425 Monolignol Biosynthesis Gene Families AT5G48930 26.761 1.61e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1252g00001 - - psat:127075665 746.503