LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1243g00007	ATGAGTCCATCAACACCATCTCTTCCACCTCTGGAAGTGTTGATGGACCTTGAGAATGAGAACAATGGTAGAGAAACCAGAAAACTATGGGTGTTGAATCCTCCAGAGCCACCATGCATGCTGCATTGGGTCGCGGACAATATCAAGGACAGCGTATTACATTGTCCGAATCTGAACAGATTCTTTTCTCTCAAACATCAACCTTTGGATAAAACAGTGTTACCTTTGTTGCATGGTTTGTTTCCCATTCTTAAGTCATTAAAAAGCTATGATGTTGATAAGTTCAAGTGTGACGTATTGGCGGGTTTAATCCTCGCAATCTTCGCTATTCCTCAGGCTATGGGAAATGCGAGTTTGGCGAAGATGAGTCCTGAATATGGCCTATATACAAGTGTTGTTCCGCCTATTATTTATGCTTTGTTGGCGAGTTCGAGGGAGATAGTAATAGGACCTGTAACTGTGGATTCATTGCTACTTTCTTCAATGATTCAAACATTGAAAGATCCTGTAAATGATCCCATTGCTTATACTCATCTTGTTTTGACTGCAACTTTTTTTACTGGTGTCTTCCAAGTTGCTTTCGGATTCCTCAGATTTGGATTTCTGGTAGATTATCTTTCTCATGCCACGATAATCGGGTTCTTGGCAGCAGTTGCCATAGGCATTGTATTACAACAATTGAAAGCGCTATTCGGAATCACCAACTTTACAAACAAAGCCGATTTAATCTCTGTGATTAAATCTCTTTGGACATCTTACATAAACCAATCAGAATGGCATCCTTACAATTTTATCATTGGATTCTCATTTTTGTCCTTCATCATATTTACTAGATTACTGGGGAAAAGGAAAAAGAAATTCTTGTGGCTATCACACATGGCTCCTCTTCTTTCATTCATTATATCAACTGTTATAGCATATAGAGTAAATGTTCATCAACTCAAATTTGAAGACTATAAAATCGAAGTTTTAGGACCGATCAAAGGAGGTAGTTTGAATCCAAGTTCACTCAATCAATTACAGCTTGATGGTAATGGTAAATATTTAGGTGCTTTGATGAAAATAGCATTTACAGTTGCGATTATTTCAACCACGGAATCTATAGCTGTTGCAAGAATATATGCATCACTAAGAGGTTACAATATTGATCCAAATAGAGAAGTTCTATCCTTAGGGATAATGAACATTTTCGGATCCTTCACTTCTTGCTATGTTGCATCAGGTTCTATTGCTCGCACGGCTGTAAACTATAACGCTGGTTCGCAAACAACGGTGTCAAGCATAGTGATGGCGCTCACGGTGTTGACGTCGCTTAAATTTTTGACAAAACTGTTATATTTCACTCCAAAAGCAATGCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTTATTGATTATAAAAAAGCATATGAAATTTGGAAAGTTGATAAATTAGATTTTCTTGCATGTGCTGGAGCATTCTTTGGTGTGTTGTTTTCATCTGTCGAAATAGGCCTTGCAATTGGGGTCATGATATCATTTGCGAAGATAATTTTGATATCGATTCAACCTGGTGTAACGGTTATTGGAAGGTTTCCGGGAACTGATGCATTTGGCGACGTAGAACAATATCCGATGGTGATTAACATGCCCGGAGTTATGGTTGTTAGTATAAAATCTGCATGGCTTTGTTTTGCAAATGCAAGTCCTATAAGGGAAAGGATTGAGAGATGGGTGACTGAAGAAAAAGGTGAAAATGGTAAAGGAGAAAGTACCATCAAATTTGTCATTATTGATGCATCAAGTCTTGTGAGTATTGACACAGCAGGAATAGCTTCGCTGGTGGAGCTGAATAATAATCTTATGTTACATGGAGTCACGTTATCCATTGCTAACCCGAGATGGCAAGTGATTCACAAATTAAGATTGGCTAACTTTGTAACTGAAATTGGAGGAAGGGTTTTTCTGTCTGTGGGAGAAGCTATTGATGCAATACTTAGTGCAAAAATGGCTTCCGTATAA	2004	0.3822	MSPSTPSLPPLEVLMDLENENNGRETRKLWVLNPPEPPCMLHWVADNIKDSVLHCPNLNRFFSLKHQPLDKTVLPLLHGLFPILKSLKSYDVDKFKCDVLAGLILAIFAIPQAMGNASLAKMSPEYGLYTSVVPPIIYALLASSREIVIGPVTVDSLLLSSMIQTLKDPVNDPIAYTHLVLTATFFTGVFQVAFGFLRFGFLVDYLSHATIIGFLAAVAIGIVLQQLKALFGITNFTNKADLISVIKSLWTSYINQSEWHPYNFIIGFSFLSFIIFTRLLGKRKKKFLWLSHMAPLLSFIISTVIAYRVNVHQLKFEDYKIEVLGPIKGGSLNPSSLNQLQLDGNGKYLGALMKIAFTVAIISTTESIAVARIYASLRGYNIDPNREVLSLGIMNIFGSFTSCYVASGSIARTAVNYNAGSQTTVSSIVMALTVLTSLKFLTKLLYFTPKAMLAAIILSAVPGLIDYKKAYEIWKVDKLDFLACAGAFFGVLFSSVEIGLAIGVMISFAKIILISIQPGVTVIGRFPGTDAFGDVEQYPMVINMPGVMVVSIKSAWLCFANASPIRERIERWVTEEKGENGKGESTIKFVIIDASSLVSIDTAGIASLVELNNNLMLHGVTLSIANPRWQVIHKLRLANFVTEIGGRVFLSVGEAIDAILSAKMASV	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1243g00007	667	CDD	STAS_SulP_like_sulfate_transporter	538	650	-	-
	Vivi1243g00007	667	Pfam	STAS domain	538	655	IPR002645	-
	Vivi1243g00007	667	PANTHER	SULFATE TRANSPORTER	63	660	IPR001902	GO:0016020\|GO:0055085
	Vivi1243g00007	667	ProSiteProfiles	STAS domain profile.	557	659	IPR002645	-
	Vivi1243g00007	667	Pfam	Sulfate permease family	95	485	IPR011547	GO:0016020
	Vivi1243g00007	667	SUPERFAMILY	SpoIIaa-like	543	659	IPR036513	-
	Vivi1243g00007	667	Gene3D	STAS domain	517	662	IPR036513	-
	Vivi1243g00007	667	NCBIfam	sulfate permease	82	651	IPR001902	GO:0016020\|GO:0055085
	Vivi1243g00007	667	ProSitePatterns	SLC26A transporters signature.	124	145	IPR018045	GO:0008271\|GO:0008272

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1243g00007	27	664	Inorganic Solute Cotransporters	AT5G10180	52.886	0.0	681

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1243g00007	K17469		-	gmx:100817841	884.019