Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1243g00006 ATGACATCTTCAACAGTCGATACCTGCAAATCTGATGATTTGCAGGTTGACATTGAGAAGAACTTGCCACAGGATGTAAGGTCTCAGTGGATTCTTAATGCTCCTGAGCCTCCAAGTCCTTGGCATGTAGCTGCAGATTCTGTGAGGAAAACAGTTTCTAATTTTAGAGGCAAAGTTTCCTCTCTAAGTGATCGATCTTGCGGTACAGTCCTTCTTTCAGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGCAGAAGCTACACTGCTGCTAAATTTAGGAAGGACTTTCTTGCTGGACTCACTATTGCTAGTCTATGTATTCCTCAGAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTATATACGAGCGTTGTTCCGCCGCTGATCTACGCTGTAATGGGAACTTCGCGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCGCTGTTGTTATCATCAATGGTACAGAAGCTAGTAGATCCTTCTACTGATCCAGTTGGTTACACAAAGCTTATTTTTCTTACAACTCTCTTTGCTGGTATCTTTCAAACTTCATTTGGACTATTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACCAAAACAGACATAATCTCTGTCTTGAAAGCTGTTTGGGAAGCATTTCATAATCCTTGGAACCCTCATAATTTTATCCTGGGAGGATGTTTCTTGGCGTTCATCCTAACAACTAGATTTCTGGGTAAAAGGAAGAAGAATCTGTTCTGGTTGGCATCAATTGCACCACTTGTGTCTATTGTACTCTCAACTCTAGTTGTTTATCTAACTCGAGCGGATAAAAATGGCGTAAAAATTGTGAAACATGTCAAAGGAGGACTCAATCCAATCTCCATCAATCAGTTAGACTTTAACAGTCCACATGTTGTCGATGTTGCCAAAATTGGACTCGTTGTCGCTGTTGTTGCCCTTACTGAATCTGTTGCTGTTGGACGATCTTTTGCGTCGATCAAAGGATACCAGCTCGACGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATAGGATCTCTCACCTCGTGTTATGTTGCAACTGGTTCATTCTCTCGAACCGCGGTTAATTACGCTGCTGGATGTGAAAGTTTAATATCAAACATTGTGATGGCAGTTACAGTGATGATATCGCTACAGTTTTTGACAAATCTGTTGTATTATACACCAATTGCTATCATTGCATCAGTTATCCTCTCTGCTCTACCAGGACTCATAGACATAACTGAAGCATACAAAATTTGGAAAGTTGACAAGCTTGACTTTCTTGCTTGCATTGGAGCCTTCTTTGGTGTACTCTTTGCTTCCGTCGAGATTGGTCTTCTAGTCGCGGTGGTAATATCTTTTACAAAGATAATTCTGATATCGATTCGACCAAGCACAGAAACTTTAGGAAAACTTCCAGGAACTGATTTATTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCGGGTGTTATCATAATACGTATGAAATCCGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAAAGAAAGAATCATCAAATGGGTTACTCCGAAAGAATCAGAAGATGACAAGGGAAATTCAAAGAGTACAATTCAACTCGTAATTCTTGACACCTCGAATTTGGTGAACATTGACACTTCTGGAATTGCTTCTTTGGAGGAACTGTACAAGAATTTGTCTTCACATGGGAAACAGTTGGCGATTGTGAATCCGAGGTGGCAAGTTATACACAAGCTAAAGGTGTCGAAGTTTGTCGACAAAATAGGTGGGAGAGTTTATCTGACTGTTGAAGAAGCTGTTGTTGCAGGATGCAAGAGTAACCAGTTCTGA 1968 0.409 MTSSTVDTCKSDDLQVDIEKNLPQDVRSQWILNAPEPPSPWHVAADSVRKTVSNFRGKVSSLSDRSCGTVLLSALQVVFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPVGYTKLIFLTTLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAFHNPWNPHNFILGGCFLAFILTTRFLGKRKKNLFWLASIAPLVSIVLSTLVVYLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVVDVAKIGLVVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAVTVMISLQFLTNLLYYTPIAIIASVILSALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVVISFTKIILISIRPSTETLGKLPGTDLFCDVDQYPMAIQIPGVIIIRMKSALLCFANANFVKERIIKWVTPKESEDDKGNSKSTIQLVILDTSNLVNIDTSGIASLEELYKNLSSHGKQLAIVNPRWQVIHKLKVSKFVDKIGGRVYLTVEEAVVAGCKSNQF 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1243g00006 655 ProSiteProfiles STAS domain profile. 545 649 IPR002645 -
Vivi1243g00006 655 FunFam Sulfate transporter 31 505 652 - -
Vivi1243g00006 655 NCBIfam sulfate permease 80 637 IPR001902 GO:0016020|GO:0055085
Vivi1243g00006 655 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Vivi1243g00006 655 Pfam STAS domain 526 645 IPR002645 -
Vivi1243g00006 655 PANTHER SULFATE TRANSPORTER 61 651 IPR001902 GO:0016020|GO:0055085
Vivi1243g00006 655 CDD STAS_SulP_like_sulfate_transporter 526 635 - -
Vivi1243g00006 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Vivi1243g00006 655 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Vivi1243g00006 655 Gene3D STAS domain 505 651 IPR036513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1243g00006 24 648 Inorganic Solute Cotransporters AT5G10180 68.051 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1243g00006 K17469 - gmx:100817831 1076.62