Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1242g00006 ATGAACCTGTTGATTCTTTCATGTCATAGTTTTCAGATTCTATTTGCTCTTGGTGTGCTTTTCATGGCAACTCACATTGAAGCTTCTTCTTCTAGCTCAAAGGTTGAATACCTTCCGGGTTTTGAAGGACCACTTCCTTTTGAACTTGAAACTGGGTACATAGGGTTAGGGGAAAGTGATGATGATGATGATATGCAAGTGTTCTACTATTTTGTTAAATCAGAGAATAATCCTCAAAAAGATCCTCTTATGCTTTGGTTAAGTGGTGGCCCTGGTTGTTCTTCATTTTCTGGCCTTGTCAATCAAATAGTAATAGGTCCAATTGCATTTGAAAAAAAGGAGTACAATGGGAGCATTCCTAGTCTGATCTTGAGGCCACAATCATGGACAAAGCTATCCAATATTATGTTTGCTGATTTGCCATTTGGAACTGGTTTCTCATATGCAAAAAATGTCACTTCTCTTCGAAGCGATCGGAAGTTGGTTCACCATGTTCATCAATTTATTAGAAAGTGGTTGATTGATCATCCTGAATTTCTTTTAAATGAATTCTACATTGGAGGAGATTCATATGCTGGCATTCCGGTTCCTGCCGTTGTTCAAGAAATTTCAATTGGAAATGAAAAAGCTCTCCAACCATTGATAAATCTCAAGGGATATCTGCTAGGAAACCCTGTAACAACAGGTAAAGAAAAAAATGATCGAATCTCATATGCTCATGGAATGGGACTCATTTCTAATGAACTACATGAGTCCTTACAACAAAATTGTAAAGGAGAGTACATTGATGTAAATTCCAAAAATGCATTATGTTTAAGAGACCTCAAATCTTTTGATAAGTGTCTTTTAGGAATTAAAATGTCTCATATTTTAGACCGCTATTGTGAAGACGAGCCGCATCTATGGAGGAGATCTTTAACTCAAGAGTTTAAAGAATCTCTTAGTTATCATTTCACAGTGCCCGTGCCTGACTTAAATTGCCAAATTTATAAATTTTATCTCAACGAAAAATGGGCTAATGAAGAGCGTGTTCGCAAAGCACTACACATTCGAGAGGGTACTATAAAAAAATGGAAACGTTGTTATCGAAGTGATTTTGAGTTTTATATCCCAAACAGTGTTGAATTTCATGTGAATCTAAGCAAAAAAGGATTCCGTTCTTTGATATATAGTGGGGATCATGATTTAGTTGTTCCTTTTTTATCTACACAAGCATGGATAAAAAGTTTAAACTACTCCATTGTAGATGATTGGAGGTCATGGCTAATTAAAGATCAAGTAGCAGGATACACGAGAACTTATTCTAATCGAATGACATTTGCAACTATAAAGGGCTCGGGACATACAGGACCTGAATATACTCCTGAGCAAGGTTTTCTCATGTTTTCTAAATGGATATCTAATACACCTTTGTAA 1416 0.3602 MNLLILSCHSFQILFALGVLFMATHIEASSSSSKVEYLPGFEGPLPFELETGYIGLGESDDDDDMQVFYYFVKSENNPQKDPLMLWLSGGPGCSSFSGLVNQIVIGPIAFEKKEYNGSIPSLILRPQSWTKLSNIMFADLPFGTGFSYAKNVTSLRSDRKLVHHVHQFIRKWLIDHPEFLLNEFYIGGDSYAGIPVPAVVQEISIGNEKALQPLINLKGYLLGNPVTTGKEKNDRISYAHGMGLISNELHESLQQNCKGEYIDVNSKNALCLRDLKSFDKCLLGIKMSHILDRYCEDEPHLWRRSLTQEFKESLSYHFTVPVPDLNCQIYKFYLNEKWANEERVRKALHIREGTIKKWKRCYRSDFEFYIPNSVEFHVNLSKKGFRSLIYSGDHDLVVPFLSTQAWIKSLNYSIVDDWRSWLIKDQVAGYTRTYSNRMTFATIKGSGHTGPEYTPEQGFLMFSKWISNTPL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1242g00006 471 FunFam Carboxypeptidase 374 468 - -
Vivi1242g00006 471 Pfam Serine carboxypeptidase 39 468 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 SUPERFAMILY alpha/beta-Hydrolases 35 470 IPR029058 -
Vivi1242g00006 471 Gene3D alpha/beta hydrolase 28 471 IPR029058 -
Vivi1242g00006 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 455 IPR001563 GO:0004185|GO:0006508
Vivi1242g00006 471 FunFam Serine carboxypeptidase-like 11 29 471 - -
Vivi1242g00006 471 FunFam Carboxypeptidase 326 470 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1242g00006 29 64 Calmodulin-binding Proteins AT2G22960 61.111 9.30e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1242g00006 K16296 - tpra:123922058 709.138