Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1242g00005 ATGAACCTGTTGATTCTTTCATGTCATAGTTTTCAGATTCTATTTGCTCTTGGTGTGCTTTTCATGGCAACTCACATTGAAGCTTCTTCTTCTAGCTCAAAGGTTGAATACCTTCCGGGTTTTGAAGGACCACTTCCTTTTGAACTTGAAACTGGGTACATAGGGTTAGGGGAAAGTGATGATGATGATGATATGCAAGTGTTCTACTATTTTGTTAAATCAGAGAATAATCCTCAAAAAGATCCTCTTATGCTTTGGTTAAGTGGTGGCCCTGGTTGTTCTTCATTTTCTGGCCTTGTCAATCAAATAGTAATAGGTCCAATTGCATTTGAAAAAAAGGAGTACAATGGGAGCATTCCTAGTCTGATCTTGAGGCCACAATCATGGACAAAGCTATCCAATATTATGTTTGCTGATTTGCCATTTGGAACTGGTTTCTCATATGCAAAAAATGTCACTTCTCTTCGAAGCGATCGGAAGTTGGTTCACCATGTTCATCAATTTATTAGAAAGTGGTTGATTGATCATCCTGAATTTCTTTTAAATGAATTCTACATTGGAGGAGATTCATATGCTGGCATTCCGGTTCCTGCCGTTGTTCAAGAAATTTCAATTGGAAATGAAAAAGCTCTCCAACCATTGATAAATCTCAAGGGATATCTGCTAGGAAACCCTGTAACAACAGGTAAAGAAAAAAATGATCGAATCTCATATGCTCATGGAATGGGACTCATTTCTAATGAACTACATGAGTCCTTACAACAAAATTGTAAAGGAGAGTACATTGATGTAAATTCCAAAAATGCATTATGTTTAAGAGACCTCAAATCTTTTGATAAGTGTCTTTTAGGAATTAAAATGTCTCATATTTTAGACCGCTATTGTGAAGACGAGCCGCATCTATGGAGGAGATCTTTAACTCAAGAGTTTAAAGAATCTCTTAGTTATCATTTCACAGTGCCCGTGCCTGACTTAAATTGCCAAATTTATAAATTTTATCTCAACGAAAAATGGGCTAATGAAGAGCGTGTTCGCAAAGCACTACACATTCGAGAGGGTACTATAAAAAAATGGAAACGTTGTTATCGAAGTGATTTTGAGTTTTATATCCCAAACAGTGTTGAATTTCATGTGAATCTAAGCAAAAAAGGATTCCGTTCTTTGATATATAGTGGGGATCATGATTTAGTTGTTCCTTTTTTATCTACACAAGCATGGATAAAAAGTTTAAACTACTCCATTGTAGATGATTGGAGGTCATGGCTAATTAAAGATCAAGTAGCAGGAACTGGGTTTCTTGCAAGATTAATAGCTGAATTGTTGTCAATCTCTAGCACCAATGGTCTCCTAACATGGACCTGCACTTCATTGAGTACATACTTGATCTAG 1389 0.3629 MNLLILSCHSFQILFALGVLFMATHIEASSSSSKVEYLPGFEGPLPFELETGYIGLGESDDDDDMQVFYYFVKSENNPQKDPLMLWLSGGPGCSSFSGLVNQIVIGPIAFEKKEYNGSIPSLILRPQSWTKLSNIMFADLPFGTGFSYAKNVTSLRSDRKLVHHVHQFIRKWLIDHPEFLLNEFYIGGDSYAGIPVPAVVQEISIGNEKALQPLINLKGYLLGNPVTTGKEKNDRISYAHGMGLISNELHESLQQNCKGEYIDVNSKNALCLRDLKSFDKCLLGIKMSHILDRYCEDEPHLWRRSLTQEFKESLSYHFTVPVPDLNCQIYKFYLNEKWANEERVRKALHIREGTIKKWKRCYRSDFEFYIPNSVEFHVNLSKKGFRSLIYSGDHDLVVPFLSTQAWIKSLNYSIVDDWRSWLIKDQVAGTGFLARLIAELLSISSTNGLLTWTCTSLSTYLI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1242g00005 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 425 IPR001563 GO:0004185|GO:0006508
Vivi1242g00005 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Vivi1242g00005 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Vivi1242g00005 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Vivi1242g00005 462 FunFam Serine carboxypeptidase-like 19 28 300 - -
Vivi1242g00005 462 Pfam Serine carboxypeptidase 39 429 IPR001563 GO:0004185|GO:0006508
Vivi1242g00005 462 Gene3D alpha/beta hydrolase 28 435 IPR029058 -
Vivi1242g00005 462 SUPERFAMILY alpha/beta-Hydrolases 35 430 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1242g00005 29 64 Calmodulin-binding Proteins AT2G22960 61.111 8.57e-08 50.4