Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1242g00002 ATGCTGAAACTAATAGGTCCAATTACAATGGAAAAGAAGGAGTATAACGGGAGCATTCCTAGTCTGGTCTTGAGGCCACAATCATGGACAAAGCTATGCAACATTATGTTTGCAAATTTGCCATTTGGAACAGGTTTCTCATATGCAAAAAATACTTCTTCTCATCGAAGCGATCGAAAGTTTGTTCACCATGTTCATCAATTTATTAGAAAGTGGTTGATTGATCATCCTGAATTTCTTTCAAATGAATTCTACGTTGGAGGAGATTCATATGCTGGGATTCCTATCCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGGGAAAGCTCTCCAACCATTGATAAATCTCAAGGGATATCTACTAGGGAACCCTGTAACAACACGTAAAGAAAAAAATGATCGAATCTCATATGCTCATGGAATGGGGCTCATTTCCAATGAACTATATGAGTCCTTACAACAAAATTGTAAAGGAGAGTATATTGATGTAAATTCCAAAAATGTGTTATGTTTAAGAGATCTCCAATATTTTGATAAGTGTATTTCAGGAATTAAACGATCGCATATTTTAGATTACTATTGTGAAGATGAGCCGCATGTATGGAGGAGATCTTTAACTCAAGAGTTTAAAGAATCTCTTAGTTATCATCTCACACCGCCCGTGCCTGACTTACGTTGCCAACTTTATAAATTTTATCTCAACGAAATATGGGCTAATGAAGAGCGTGTTCGCAAAGCACTGCATATTCGGGAGGGTACTATAGAAAAATGGATACGTTGTTATCGGAATGATTTTGTGTTTGATATCACAAACAGTGTTGAATTTCATGTAAATCTAAGTAAAAAAGGATTCCGCTCTTTGATATATAGTGGAGATCATGATTTAGTTGTTCCTTTCTTATCTACACAATCATGGATAAAAGGTCTAAACTACTCTATTGTGGATGATTGGAGGTCATGGCTAATTAAAGATCAAGTAGCAGGGTGTGGATGTTGGCTTAAGAATAACATTTCTCATTTGATTTAG 1029 0.3557 MLKLIGPITMEKKEYNGSIPSLVLRPQSWTKLCNIMFANLPFGTGFSYAKNTSSHRSDRKFVHHVHQFIRKWLIDHPEFLSNEFYVGGDSYAGIPIPAIVQEISNGNGKALQPLINLKGYLLGNPVTTRKEKNDRISYAHGMGLISNELYESLQQNCKGEYIDVNSKNVLCLRDLQYFDKCISGIKRSHILDYYCEDEPHVWRRSLTQEFKESLSYHLTPPVPDLRCQLYKFYLNEIWANEERVRKALHIREGTIEKWIRCYRNDFVFDITNSVEFHVNLSKKGFRSLIYSGDHDLVVPFLSTQSWIKGLNYSIVDDWRSWLIKDQVAGCGCWLKNNISHLI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1242g00002 342 Pfam Serine carboxypeptidase 5 329 IPR001563 GO:0004185|GO:0006508
Vivi1242g00002 342 SUPERFAMILY alpha/beta-Hydrolases 4 336 IPR029058 -
Vivi1242g00002 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 72 97 IPR001563 GO:0004185|GO:0006508
Vivi1242g00002 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 38 48 IPR001563 GO:0004185|GO:0006508
Vivi1242g00002 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 25 37 IPR001563 GO:0004185|GO:0006508
Vivi1242g00002 342 Gene3D alpha/beta hydrolase 1 337 IPR029058 -
Vivi1242g00002 342 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 324 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1242g00002 238 340 Calmodulin-binding Proteins AT2G22960 54.808 8.82e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1242g00002 K16296 - tpra:123922058 515.383