Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1242g00001 ATGCTGAAACTAATAGGTCCAATTACAATGGAAAAGAAGGAGTATAACGGGAGCATTCCTAGTCTGGTCTTGAGGCCACAATCATGGACAAAGCTATGCAACATTATGTTTGCAAATTTGCCATTTGGAACAGGTTTCTCATATGCAAAAAATACTTCTTCTCATCGAAGCGATCGAAAGTTTGTTCACCATGTTCATCAATTTATTAGAAAGTGGTTGATTGATCATCCTGAATTTCTTTCAAATGAATTCTACGTTGGAGGAGATTCATATGCTGGGATTCCTATCCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGGGAAAGCTCTCCAACCATTGATAAATCTCAAGGGATATCTACTAGGGAACCCTGTAACAACACGTAAAGAAAAAAATGATCGAATCTCATATGCTCATGGAATGGGGCTCATTTCCAATGAACTATATGAGTGTATTTCAGGAATTAAACGATCGCATATTTTAGATTACTATTGTGAAGATGAGCCGCATGTATGGAGGAGATCTTTAACTCAAGAGTTTAAAGAATCTCTTAGTTATCATCTCACACCGCCCGTGCCTGACTTACGTTGCCAACTTTATAAATTTTATCTCAACGAAATATGGGCTAATGAAGAGCGTGTTCGCAAAGCACTGCATATTCGGGAGGGTACTATAGAAAAATGGATACGTTGTTATCGGAATGATTTTGTGTTTGATATCACAAACAGTGTTGAATTTCATGTAAATCTAAGTAAAAAAGGATTCCGCTCTTTGATATATAGTGGAGATCATGATTTAGTTGTTCCTTTCTTATCTACACAATCATGGATAAAAGGTCTAAACTACTCTATTGTGGATGATTGGAGGTCATGGCTAATTAAAGATCAAGTAGCAGGATATACGAGGACTTATTCTAATCAAATGACATTTGCAACTCTAAAGGGGTCAGGACATACAGGTCCTGAATACACTCCTTGGGCAGGTTTTGTCATGTTTTCTAAATGGATATCTAATACACCTTTATAA 1029 0.3654 MLKLIGPITMEKKEYNGSIPSLVLRPQSWTKLCNIMFANLPFGTGFSYAKNTSSHRSDRKFVHHVHQFIRKWLIDHPEFLSNEFYVGGDSYAGIPIPAIVQEISNGNGKALQPLINLKGYLLGNPVTTRKEKNDRISYAHGMGLISNELYECISGIKRSHILDYYCEDEPHVWRRSLTQEFKESLSYHLTPPVPDLRCQLYKFYLNEIWANEERVRKALHIREGTIEKWIRCYRNDFVFDITNSVEFHVNLSKKGFRSLIYSGDHDLVVPFLSTQSWIKGLNYSIVDDWRSWLIKDQVAGYTRTYSNQMTFATLKGSGHTGPEYTPWAGFVMFSKWISNTPL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1242g00001 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 72 97 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 38 48 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 309 322 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 25 37 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 Pfam Serine carboxypeptidase 5 339 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Vivi1242g00001 342 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 326 IPR001563 GO:0004185|GO:0006508
Vivi1242g00001 342 SUPERFAMILY alpha/beta-Hydrolases 4 341 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1242g00001 209 342 Calmodulin-binding Proteins AT2G22960 60.000 1.76e-55 177