Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi123g00034 ATGAGTAGCACTGACCCCTACGGTTTCCCGGAGGATCTCCGCCGTATGATATCATCAAGAACCACCACCACCACCACTGAACCACCACCTCCACCACCCTATAATCTCTATGCTTCTGCTTTTCATCCACCTAATAATTATTCCTACGACCCTTCCTCTATCATCGTTGGTGATGTTTTCTATCCTCGTAGTGCCTTCCCTCACCACAACCACTATGATTATTCCTCCTCCACTCTCAACATTCCTTCAACTAGCTCCACCACTATTCCTCCTGCAAATCCTAATTCAGATCATGCTACTGCTTCTGCTGCTTTCTTTGTTGGCTTAGAAACAAACTCTGCTGATAACAAAGAATGGCTTGGTAACTTTGATTCTTGTAACAATAGATGGCCTAGACAAGAAACACTCTCTCTTCTAGAAATCAGATCTCGTCTTGATTCTAAGTTCAAGGAGAATAATCAGAAAGCACCCTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAGTTTGGATACCAAAGAAGTGGAAAGAAATGCAAGGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAAACAAAGGAAGGTAAGGCTAGTAGACAAGATGGTAAACACTACAGATTCTTTAGGCAGCTTGAAGCAATATGTGGAGAATCAAATACAAACACTCATGCTTCAATTTCAGACAAAACACCTCATGCTGCTTTTGTTGCTACTACTCAAACTCCAAGCTTCACAATGAATCAAGAAAATGTTAATGGTGTTGAGGATCATAGTTTGATTAATAGCCTTAAGTATAAATCAGATAGCTTAATGAGTTTCTCGAATTCGTCTGAGTTTGAGACATCCTCGTCGGAAAACAACGACGAGGATCTCTCGGCTATTGCGCACTCGATGAGGTCGTCGTCGAAGCAGAAAGGGATAGAGTTAGAGAAAGGTGATAGGAGGGTGAGAAAAAGTTGGAGAGGTAAAGTGGAGGAGATTGTGGATTCTCACATGAAGAAGATTATAGAGACACAAGATGCATGGATGGAGAGAATGTTGAGTGTGGTTGAACAAAGAGAACAAGAGATGGCATCAAAGGAAGAAGAAAGGAAGAGAAAAGAGTCAATGAGGTTTGATCAAGAGATACATAAACTTTGGGCTAAAGAAAAAGCTTGGGTTGAAGCAAGAGATGCTGCATTGTTAGAAGTTGTGAGAAAACATATTGGGTCGATAGAAGGAACAAATAACAAGAATGAAAATGGTAGAAACTATGAATACCCTTTTGAGAGTTTGGAGAATCATAGATGGACAGAAATGGAGATTTCAAGTTTGATACAACTAAGGACTAGTTATGAAGATCAAGTAAGAGAAAAAGGGTATTTGGAAGATGGTGCTTGGGATGACATAGGTGAGAAAATGGTGTATATGGGATTCAACAGAAATGGAGCAGAATGCAAGAAAATATGGGATGAGATTAGTGTGTCCCTTAGAAGGACAGTGGACTGTGGAGTCAAAATCACAAGACCTTGGTGTTTGGGACTTAAGGTGACAGATGATGACGACATTTGA 1554 0.4022 MSSTDPYGFPEDLRRMISSRTTTTTTEPPPPPPYNLYASAFHPPNNYSYDPSSIIVGDVFYPRSAFPHHNHYDYSSSTLNIPSTSSTTIPPANPNSDHATASAAFFVGLETNSADNKEWLGNFDSCNNRWPRQETLSLLEIRSRLDSKFKENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGESNTNTHASISDKTPHAAFVATTQTPSFTMNQENVNGVEDHSLINSLKYKSDSLMSFSNSSEFETSSSENNDEDLSAIAHSMRSSSKQKGIELEKGDRRVRKSWRGKVEEIVDSHMKKIIETQDAWMERMLSVVEQREQEMASKEEERKRKESMRFDQEIHKLWAKEKAWVEARDAALLEVVRKHIGSIEGTNNKNENGRNYEYPFESLENHRWTEMEISSLIQLRTSYEDQVREKGYLEDGAWDDIGEKMVYMGFNRNGAECKKIWDEISVSLRRTVDCGVKITRPWCLGLKVTDDDDI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi123g00034 517 Coils Coil 344 371 - -
Vivi123g00034 517 CDD GT1 128 194 - -
Vivi123g00034 517 Pfam Myb/SANT-like DNA-binding domain 128 215 IPR044822 -
Vivi123g00034 517 Pfam Myb/SANT-like DNA-binding domain 429 496 IPR044822 -
Vivi123g00034 517 ProSiteProfiles Myb-like domain profile. 128 187 IPR001005 -
Vivi123g00034 517 SMART sant 427 490 IPR001005 -
Vivi123g00034 517 SMART sant 126 189 IPR001005 -
Vivi123g00034 517 ProSiteProfiles Myb-like domain profile. 423 488 IPR001005 -
Vivi123g00034 517 FunFam trihelix transcription factor PTL-like 130 192 - -
Vivi123g00034 517 PANTHER FI21293P1 97 498 - -
Vivi123g00034 517 Gene3D - 130 192 - -
Vivi123g00034 517 Gene3D - 431 493 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi123g00034 129 493 Trihelix Transcription Factor Family AT5G03680 41.432 7.54e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi123g00034 Myb_DNA-bind_4 7.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi123g00034 - - lang:109336385 541.191