Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi123g00030 ATGAATGCTCTCAATTCTCGTTTAAGCAAAGACTTCATGCCAACTGATGATGAACTTCTTCAAAAGTTTCTCTACAACAAAATTAACAATAAACCAATTCCCGATTATCTCAACATTATCGAACATGATTTGTTTGGTACTAATAAGAATCCGTTGGATATATGGAATGAGTTTGAAGCTTCGTTCTCATATGGCGGAAAAGACCTATATTTCTTTACTACCTTAAAGAAGAAATCTGCTACAAGCACACGCTCCGTTCGCACTATTGGCAGTGGTAATTGGAAAGGCGAAGACACCGGAAAAAATATATTTGCCAAAGACACGGACCAACTCCTCGGTTTAAAAAAACGTTATCGTTTTGAGAGGAGTAACACTCCTCAAGATGGTGGATGGATCTTGCACGAATATAACCTCCACAAATCTTTGGTTAACAATACTCCGGTCAACAATTATGTTCTATGCAGATTTAGAAAGAATTTGAAATTGGAATCAAAAAATACACAAGCAAAATCAAGTATAGGTGATCAATCCAATTCTCATTTAAGAAATATTTCACGAATAAAAAATTGTTCTGCACAAGAGAGTAAAGAAAGAGAACCTATCATTCATAAACAAGAAGAACCTATCATTCCTAAACAAATAGAACCACTCATATCGGGAAATGATGTTTTGGTGAAAAAATATATTATTTATGAAGAAGCAATAACTCAATCAAATGATGGTGGAAACGAGAAAAAATATGGGGATGATGATGATGATGAGATGTCTTGTCCTGAATTTTTTGCAAAGAATCTGTTGGAAATTGGAAATTAA 813 0.3407 MNALNSRLSKDFMPTDDELLQKFLYNKINNKPIPDYLNIIEHDLFGTNKNPLDIWNEFEASFSYGGKDLYFFTTLKKKSATSTRSVRTIGSGNWKGEDTGKNIFAKDTDQLLGLKKRYRFERSNTPQDGGWILHEYNLHKSLVNNTPVNNYVLCRFRKNLKLESKNTQAKSSIGDQSNSHLRNISRIKNCSAQESKEREPIIHKQEEPIIPKQIEPLISGNDVLVKKYIIYEEAITQSNDGGNEKKYGDDDDDEMSCPEFFAKNLLEIGN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi123g00030 270 SUPERFAMILY NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Vivi123g00030 270 Gene3D NAC domain 15 162 IPR036093 GO:0003677|GO:0006355
Vivi123g00030 270 PANTHER NAC TRANSCRIPTION FACTOR 56 12 191 - -
Vivi123g00030 270 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Vivi123g00030 270 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi123g00030 12 158 NAC Transcription Factor Family AT3G15510 33.333 2.04e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi123g00030 NAM 3.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi123g00030 - - vvo:131620211 517.309