Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi123g00017 ATGATTGTAATATGCAAATTACAATACAGGGCATCTGAAGAAGCCCTGCAACCTGCATTTTCAAGTGCTAGACGTGCAATATATGATGCACTACTGAAGTGTACGAAGCCAACCGTATTATGGGATCTTTATGCTTTTATGCCTGGGCCTTCCAGTTTTCAGAACACTTCTCCGTTGGTGCGCTTATTAGATGAATATTTTCGACTTATTGGCAAAGTTTCTCATCATGCTTCATTGGACATGATTGAAAGCGGGTCCTTCACCTTGTCAAATGAGTTATGGAGAATAAGTGGTGTGAATTCGAGTTATACAATGTGCCAGAATTATCCATTTGCTTTGGTTGTTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTGCAAATTCCGCGCAAGATGCCGACTGCCTGTAATTTCTTGGTGTCATCCTGTTACTGGCGCAGCTCTTGCACGTTCTTCCCAGCCTTTAGTTGGTCTCATGAGGAATATGAGGAGCAACCTGGATGAAAAACTCGTGGCTGCACTTTGCAGCAACCTTGATGGCTCAAGGAGAAAACTATATATCGCTGATGCAAGACCAAAGAAAAATGCAATAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGGTTATCTTTTTTGGGATAGACAACATTCATGCAATGAGAGAGAGCTTTGTTCGGCTCCGAGAATACATGGACACTCATGGTAGAACATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCAATATGGGGTGGCGGCAATTTAAGCAGTATGTCTGCTTCAGTGTCAACCCTTGGGGACAGTGGATGGTTGTTGCATATTCAGAATGTCTTAGCTGGTGCAGCTTGGATTGCTGCTCGTATTGCTATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGACGGATGGGATAGGACAAGCCAGTTAGTTTCACTTGCTAATTTGTTGCTTGATCCGTACTATCGGACATTTAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCGTTTTCTGATCGTGTGGGGACACCATCTATCTCTGAATGTGGCAACGTGTCTTTCGAGTTATCTAGGCAACAGTCTTCAACTAGCATCCCATCATCACCCATGCACCAGTCATCAGGGACATTCACGTCTCAACCTCCAGCTTCATCTCATGCACATAACTCAAACAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTGTCACAAGTGATGCGGATGTATCCTCAGGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTCTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAGAAGGAGAGGCTGCAGTGCAATATTTTTGAAAGTTGTGGATGTGTATGGGCATACCTGGCTGATAGGCGGAGATCAGAAGGAGCTTCCCATGTGCACTGTAATCCCTTTTATGAACCACTGAAGTACAATGGGCCTCTTCTCCCCCCTGCAGCGGCGTTAGCCCCAACTTTATGGCCTCAATTCCACCTTCGTTGGGCCTGCCCAGAAGAAGCACAGAGTGGAGAAATTGAAGCACAATGTAGGAAGATAAAGCTGAAAAATCATGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAACTTAGAGAAAATACAAATACTATAGAATCGTTGAATGCTGAATTGCGTCGTGAGAAACTGTTAAACATCTCAGCAATGACCAAGTCGAAAAGGATAATAAAAGAAAACACAGACATAAAGCGAGCAATTCAGTCAATTGGGTGCAAGATTCACATTTCTAATAGTGGTGATTGCATTCTTGACATTGAAAACAACCCAGAGAATGCAGTTCAAAAATTGCATTTTTCCTCTAGGCAAGTATCAAGTAGTGCTGTGATTAACGACAAAAAGGATATATCTCTTTCGGTAACAGAAGATGATGAAGGAAACAATGTTATTAGTCGAATTTGTGAAACTCTATGCCCTTTTCGCAGTAGAGATGGAGGCTGCATGTGGCCAAATGGTGCTTGTGCTCAACTAGGTAGCCAGTTTGTTGGTTTGAAGGCAAATTTTGATGCATTTGACCGGCTTTCGATTGATGACAGTTATTTCAAGCCCAAGTAA 2163 0.429 MIVICKLQYRASEEALQPAFSSARRAIYDALLKCTKPTVLWDLYAFMPGPSSFQNTSPLVRLLDEYFRLIGKVSHHASLDMIESGSFTLSNELWRISGVNSSYTMCQNYPFALVVPKSISDDEVLQACKFRARCRLPVISWCHPVTGAALARSSQPLVGLMRNMRSNLDEKLVAALCSNLDGSRRKLYIADARPKKNAIANGAMGGGSESSSNYFQSEVIFFGIDNIHAMRESFVRLREYMDTHGRTSSDGMSSFLRHGGSIWGGGNLSSMSASVSTLGDSGWLLHIQNVLAGAAWIAARIAMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGTPSISECGNVSFELSRQQSSTSIPSSPMHQSSGTFTSQPPASSHAHNSNNYSPIFLQWADCVSQVMRMYPQAFEFSAAFLVDFLDCMLSSRFGNFFFNSEKERLQCNIFESCGCVWAYLADRRRSEGASHVHCNPFYEPLKYNGPLLPPAAALAPTLWPQFHLRWACPEEAQSGEIEAQCRKIKLKNHEMQKAKEVAERKLRENTNTIESLNAELRREKLLNISAMTKSKRIIKENTDIKRAIQSIGCKIHISNSGDCILDIENNPENAVQKLHFSSRQVSSSAVINDKKDISLSVTEDDEGNNVISRICETLCPFRSRDGGCMWPNGACAQLGSQFVGLKANFDAFDRLSIDDSYFKPK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi123g00017 720 ProSiteProfiles Myotubularin phosphatase domain. 71 522 IPR010569 -
Vivi123g00017 720 ProSitePatterns Tyrosine specific protein phosphatases active site. 310 320 IPR016130 GO:0016311|GO:0016791
Vivi123g00017 720 Coils Coil 540 581 - -
Vivi123g00017 720 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 526 IPR029021 -
Vivi123g00017 720 CDD PTP-MTM-like 134 424 - -
Vivi123g00017 720 PANTHER MYOTUBULARIN-RELATED 22 651 IPR030564 -
Vivi123g00017 720 MobiDBLite consensus disorder prediction 380 406 - -
Vivi123g00017 720 Pfam Myotubularin-like phosphatase domain 55 463 IPR010569 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi123g00017 24 720 Protein tyrosine phosphatase (PTP) family AT3G10550 67.045 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi123g00017 K18081 - gmx:100781842 1083.94