Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi123g00015 ATGAGAATTATAGTCTTTGGTTTTAGGCCTCGTACGAAACAGAGACGTGCAATATATGATGCACTACTGAAGTGTACGAAGCCAACCGTATTATGGGATCTTTATGCTTTTATGCCTGGGCCTTCCAGTTTTCAGAACACTTCTCCGTTGGTGCGCTTATTAGATGAATATTTTCGACTTATTGGCAAAGTTTCTCATCATGCTTCATTGGACATGATTGAAAGCGGGTCCTTCACCTTGTCAAATGAGTTATGGAGAATAAGTGGTGTGAATTCGAGTTATACAATGTGCCAGAATTATCCATTTGCTTTGGTTGTTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTGCAAATTCCGCGCAAGATGCCGACTGCCTGTAATTTCTTGGTGTCATCCTGTTACTGGCGCAGCTCTTGCACGTTCTTCCCAGCCTTTAGTTGGTCTCATGAGGAATATGAGGAGCAACCTGGATGAAAAACTCGTGGCTGCACTTTGCAGCAACCTTGATGGCTCAAGGAGAAAACTATATATCGCTGATGCAAGACCAAAGAAAAATGCAATAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGGTTATCTTTTTTGGGATAGACAACATTCATGCAATGAGAGAGAGCTTTGTTCGGCTCCGAGAATACATGGACACTCATGGTAGAACATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCAATATGGGGTGGCGGCAATTTAAGCAGTATGTCTGCTTCAGTGTCAACCCTTGGGGACAGTGGATGGTTGTTGCATATTCAGAATGTCTTAGCTGGTGCAGCTTGGATTGCTGCTCGTATTGCTATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGACGGATGGGATAGGACAAGCCAGTTAGTTTCACTTGCTAATTTGTTGCTTGATCCGTACTATCGGACATTTAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCGTTTTCTGATCGTGTGGGGACACCATCTATCTCTGAATGTGGCAACGTGTCTTTCGAGTTATCTAGGCAACAGTCTTCAACTAGCATCCCATCATCACCCATGCACCAGTCATCAGGGACATTCACGTCTCAACCTCCAGCTTCATCTCATGCACATAACTCAAACAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTGTCACAAGTGATGCGGATGTATCCTCAGGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTCTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAGAAGGAGAGGCTGCAGTGCAATATTTTTGAAAGTTGTGGATGTGTATGGGCATACCTGGCTGATAGGCGGAGATCAGAAGGAGCTTCCCATGTGCACTGTAATCCCTTTTATGAACCACTGAAGTACAATGGGCCTCTTCTCCCCCCTGCAGCGGCGTTAGCCCCAACTTTATGGCCTCAATTCCACCTTCGTTGGGCCTGCCCAGAAGAAGCACAGAGTGGAGAAATTGAAGCACAATGTAGGAAGATAAAGCTGAAAAATCATGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAACTTAGAGAAAATACAAATACTATAGAATCGTTGAATGCTGAATTGCGTCGTGAGAAACTGTTAAACATCTCAGCAATGACCAAGTCGAAAAGGATAATAAAAGAAAACACAGACATAAAGCGAGCAATTCAGTCAATTGGGTGCAAGATTCACATTTCTAATAGTGGTGATTGCATTCTTGACATTGAAAACAACCCAGAGAATGCAGTTCAAAAATTGCATTTTTCCTCTAGGCAAGTATCAAGTAGTGCTGTGATTAACGACAAAAAGGATATATCTCTTTCGGTAACAGAAGATGATGAAGGAAACAATGTTATTAGTCGAATTTGTGAAACTCTATGCCCTTTTCGCAGTAGAGATGGAGGCTGCATGTGGCCAAATGGTGCTTGTGCTCAACTAGGTAGCCAGTTTGTTGGTTTGAAGGCAAATTTTGATGCATTTGACCGGCTTTCGATTGATGACAGTTATTTCAAGCCCAAGTAA 2136 0.4293 MRIIVFGFRPRTKQRRAIYDALLKCTKPTVLWDLYAFMPGPSSFQNTSPLVRLLDEYFRLIGKVSHHASLDMIESGSFTLSNELWRISGVNSSYTMCQNYPFALVVPKSISDDEVLQACKFRARCRLPVISWCHPVTGAALARSSQPLVGLMRNMRSNLDEKLVAALCSNLDGSRRKLYIADARPKKNAIANGAMGGGSESSSNYFQSEVIFFGIDNIHAMRESFVRLREYMDTHGRTSSDGMSSFLRHGGSIWGGGNLSSMSASVSTLGDSGWLLHIQNVLAGAAWIAARIAMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGTPSISECGNVSFELSRQQSSTSIPSSPMHQSSGTFTSQPPASSHAHNSNNYSPIFLQWADCVSQVMRMYPQAFEFSAAFLVDFLDCMLSSRFGNFFFNSEKERLQCNIFESCGCVWAYLADRRRSEGASHVHCNPFYEPLKYNGPLLPPAAALAPTLWPQFHLRWACPEEAQSGEIEAQCRKIKLKNHEMQKAKEVAERKLRENTNTIESLNAELRREKLLNISAMTKSKRIIKENTDIKRAIQSIGCKIHISNSGDCILDIENNPENAVQKLHFSSRQVSSSAVINDKKDISLSVTEDDEGNNVISRICETLCPFRSRDGGCMWPNGACAQLGSQFVGLKANFDAFDRLSIDDSYFKPK 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi123g00015 711 PANTHER MYOTUBULARIN-RELATED 1 642 IPR030564 -
Vivi123g00015 711 MobiDBLite consensus disorder prediction 371 397 - -
Vivi123g00015 711 ProSitePatterns Tyrosine specific protein phosphatases active site. 301 311 IPR016130 GO:0016311|GO:0016791
Vivi123g00015 711 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 79 517 IPR029021 -
Vivi123g00015 711 Coils Coil 531 572 - -
Vivi123g00015 711 ProSiteProfiles Myotubularin phosphatase domain. 62 513 IPR010569 -
Vivi123g00015 711 Pfam Myotubularin-like phosphatase domain 46 454 IPR010569 -
Vivi123g00015 711 CDD PTP-MTM-like 125 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi123g00015 1 711 Protein tyrosine phosphatase (PTP) family AT3G10550 67.549 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi123g00015 K18081 - gmx:100781842 1108.59