Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi123g00010 ATGTCTTCTTCACCCACTTTGAAAGGATTTGTGCCACTTGACACCAATGCTCTTTATGATCTCCTTGGAAAAACAGTTGAAGAAATTGAAGCGGTTGATAACAAAATTCCACATGCAGAACTGTTTCCAGAAATTAATGTTGGTAGTACGTCCACCCCAGTTGAAGCTGTCAATGCAAGTAAATTGGGCAAAGATGAAGCAATGATGAATGAAGGGAATCAGGAAGACGATGTTGGAGAATTTGCTGATACTAATAGCAACAATGGAGGGCTGCAGAAAGACATATTTTGGGACAAAGATATCACCAAGGCAAGGAAGAAGGGAAATCAAGTTATGCATTTTCCAGCAGAAGTGATAAAAAAGGCTCTTCGTCCGGACATAACTTCGTGCACTATGATGGATCTCGAGACTGCTGAATATTATGACTGTAAAATCATCAAATCGAACAGGGAGTATGTGGAAATGTATCTTGCAGAAGGATGGTATTCATTTGCAAAAAACAAAAAACTGAATGTTGGAGATAAGCTGATTTTCCACTATAATTCAGAGAAAGAAATTCTGCATGTCAAGGTGTTCAGAAAAGATGGAAAGAAGCAAAACTGA 603 0.3847 MSSSPTLKGFVPLDTNALYDLLGKTVEEIEAVDNKIPHAELFPEINVGSTSTPVEAVNASKLGKDEAMMNEGNQEDDVGEFADTNSNNGGLQKDIFWDKDITKARKKGNQVMHFPAEVIKKALRPDITSCTMMDLETAEYYDCKIIKSNREYVEMYLAEGWYSFAKNKKLNVGDKLIFHYNSEKEILHVKVFRKDGKKQN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi123g00010 200 ProSiteProfiles B3 DNA-binding domain profile. 97 195 IPR003340 GO:0003677
Vivi123g00010 200 SMART B3_2 101 195 IPR003340 GO:0003677
Vivi123g00010 200 Pfam B3 DNA binding domain 111 194 IPR003340 GO:0003677
Vivi123g00010 200 CDD B3_DNA 146 193 IPR003340 GO:0003677
Vivi123g00010 200 Gene3D - 82 196 IPR015300 -
Vivi123g00010 200 SUPERFAMILY DNA-binding pseudobarrel domain 96 198 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi123g00010 B3 1.8e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi123g00010 - - vvo:131624812 408.297