Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1237g00010 ATGGCGACAAAATCCGAAGGGCGTGCTGTTGGAATAGACCTTGGCACCACATACTCTTGTGTAGCAGTGTGGCTGAAGCAACACAGTAGAGTGGAAATTATTCCCAATGACCAAGGAAACCGAACTACACCTTCTTTTGTTGCCTTCACTGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAGACTGGTGATGTCTTTGAAGTAAAAGCAACGGCTGGAAACACTCATCTAGGCGGGGAAGACTTTGATAATAGAATGTTGAATTACTTTGTAGAGGAGTTTAAAAAGAAGAATAAAATGGATATTAGTGGTAACCCAAGAGCCTTAAGGAGGTTGAGAACAGCCTGTGAAAAGGCAAAGAGGATACTGTCTTTTGCTTTTGTAACCACAGTTGAGGTAGATTCTTTATTTTGTGGAATTGATTTCTCTTCATTGATAACTCGTGCCAAGTTTGAAGAAATTAATATGGACTTGTTTAAGGAATGTATGGAAACTGTTAAGAGTTGTCTTAGTGATTCAAGTATATGCAAAAGTGATATTGATGATGTTGTTCTTGTGGGTGGCTCCTCTAGGATTCCCAAAGTGCAAGATATGTTGCAAGACTTTTTCGAAGGGAAGGATCTTTGTAAAAGCATCAACCTAGATGAAGCTGTTGCTTATGGTGCAGCTGTACAGGCTGCTATTTTGAGTGAAGGCTTTAAGAATGTCCCGAACTTGGTGATGCGAGATGTTACCCCTTTATCACTTGGTATCGAAGCAGAGATTGATCGTGTCATGAGTGTGGTGATTCCTAGGAACACTAGCATACCTATCAAGAAGTCTAAAGGATATACTACAGGTTATGATAACCACTGCAGTGTCTCGATTAGTGTTTATGAAGGTGAGAGAGCAAGAGCCACAGACAACAATCTGCTTGGTAAGTTCAGCCTTTCTTGTCTTCCAGGTGCTCCTCGGGGTCAGCCCTTAGATGTATGCTTTGTCATTGATGAAAATGGAATCCTAACTGTTTCTGCTAAAGAAGTCTCTACAGGCAATACAAATGAGATCACCATAAGCAATGACAAAGAAAGGTTGTCAGCCGTCGAAATTATAAAAATGATTGAAGAAGCTGAAAGATACAATGCTGAAGATAAGAAATTCTTAAAGAAGGCCATGGTAATGAGTGCATTGGATAAATGTGTTTATAATATGAAGAATGCATTAAAGACGGATGTTTATTTAAAACTCTCCCCTCAAGAAAGTGAGAAGATTAATAATGCAATTACGGTTGCCACAAATTTAATTGAAGGGAATGACAAAACGAATGAAATAGATGTTCTGGAGGATCATCTAAAGGAGCTGGAGAACATGTTGAAAGACCTTGTAGCTATGACTGGCTAG 1386 0.3939 MATKSEGRAVGIDLGTTYSCVAVWLKQHSRVEIIPNDQGNRTTPSFVAFTDDQRLIGDAAKNQTGDVFEVKATAGNTHLGGEDFDNRMLNYFVEEFKKKNKMDISGNPRALRRLRTACEKAKRILSFAFVTTVEVDSLFCGIDFSSLITRAKFEEINMDLFKECMETVKSCLSDSSICKSDIDDVVLVGGSSRIPKVQDMLQDFFEGKDLCKSINLDEAVAYGAAVQAAILSEGFKNVPNLVMRDVTPLSLGIEAEIDRVMSVVIPRNTSIPIKKSKGYTTGYDNHCSVSISVYEGERARATDNNLLGKFSLSCLPGAPRGQPLDVCFVIDENGILTVSAKEVSTGNTNEITISNDKERLSAVEIIKMIEEAERYNAEDKKFLKKAMVMSALDKCVYNMKNALKTDVYLKLSPQESEKINNAITVATNLIEGNDKTNEIDVLEDHLKELENMLKDLVAMTG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1237g00010 461 Gene3D - 10 64 - -
Vivi1237g00010 461 Pfam Hsp70 protein 9 64 IPR013126 GO:0005524|GO:0140662
Vivi1237g00010 461 Pfam Hsp70 protein 67 457 IPR013126 GO:0005524|GO:0140662
Vivi1237g00010 461 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 236 390 IPR029047 -
Vivi1237g00010 461 Gene3D - 65 214 - -
Vivi1237g00010 461 Gene3D - 215 229 - -
Vivi1237g00010 461 SUPERFAMILY Actin-like ATPase domain 63 231 IPR043129 -
Vivi1237g00010 461 ProSitePatterns Heat shock hsp70 proteins family signature 3. 185 199 IPR018181 -
Vivi1237g00010 461 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 390 456 IPR029048 -
Vivi1237g00010 461 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi1237g00010 461 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi1237g00010 461 PRINTS 70kDa heat shock protein signature 348 364 - -
Vivi1237g00010 461 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi1237g00010 461 FunFam Heat shock 70 kDa 80 163 - -
Vivi1237g00010 461 FunFam heat shock 70 kDa protein-like 3 79 - -
Vivi1237g00010 461 Coils Coil 432 459 - -
Vivi1237g00010 461 PANTHER HEAT SHOCK PROTEIN 70KDA 9 63 IPR013126 GO:0005524|GO:0140662
Vivi1237g00010 461 FunFam Heat shock 70 kDa protein 234 389 - -
Vivi1237g00010 461 Gene3D Actin; Chain A, domain 4 80 163 - -
Vivi1237g00010 461 Gene3D - 391 459 IPR029048 -
Vivi1237g00010 461 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 237 387 IPR029047 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1237g00010 1 78 Calmodulin-binding Proteins AT3G12580 67.470 6.70e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1237g00010 K03283 - gmx:102667578 496.123